Pseudopodoces humilis (Tibetan ground-tit): 102112411
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Entry
102112411 CDS
T02921
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X2
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phi03000
]
102112411 (PRDM1)
Transcription factors [BR:
phi03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102112411 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
CapR
Motif
Other DBs
NCBI-GeneID:
102112411
NCBI-ProteinID:
XP_005518298
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MKMDMEDADMTLWTEADFEEKCTYIVNDHPLDPSADGGTLTQAEASLPRNLTFKYASNCK
EVTGVISKEYIPKGTRFGPLVGEIYTSDTVPKNANRKYFWRIYSSGELHHFIDGFNEDKS
NWMRYVNPGYSVQEQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDFAERLHYPPSREL
TMMNLTQTHINPKQHSTDKDELYQKSIPKKEHSVKEILKMESNPPKGKDFFQTNISPVTP
EKDLDDLRKNYSPERCFFPRVVYPIRPHIPEDYLKASLAYSMDRPSYITHSPIQASTTPS
PSGRSSPDQSLKSSSPHSSPGVTVSPLAPTSQEHREPYSYLNGSYGSEGLGSYPGYAPPG
HLSPAFLPSYNPHYPKFLLPPFNMSCNNLSALNNINGINNFNLFPRMYPLYGNLLSGGSL
SHHMLNPTTLPSSLPSEGGRRLLQPDHPRDFLIPAPNSAFSITGAAASMKDKPCSPTSGS
PTAGTAASSEHIMQPKPTSVVLAATGGEEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYE
CNVCSKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVC
HKRFSSTSNLKTHLRLHSGEKPYQCKLCPAKFTQFVHLKLHKRLHTRERPHKCIHCHKSY
IHLCSLQVHLKGNCPVAPASGLSMEDLNRINEEIEKFDISDNADKLEEVEDNIDLTSIVE
KDILTMLRREMEGANLKVSLQRNLGNGLISSGCNLYESSDMSVMKLPHGHPLPLLPVKVK
QETIEPMDP
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggacatggaggatgctgacatgactctgtggacagaggctgattttgaagag
aagtgcacatatattgtaaatgatcacccgctggatcccagtgccgatggaggcacccta
actcaggcagaggcttccttgccaaggaacttgactttcaaatacgcatctaactgcaaa
gaggtcactggagttataagcaaagagtacatcccaaaaggaacacgctttggacccctg
gtaggagagatctataccagtgatactgttcccaagaatgcaaacagaaaatacttttgg
cggatctattcaagtggtgaacttcatcacttcattgatggatttaatgaggacaagagc
aactggatgcgttatgtaaaccctggctactctgttcaggagcagaacttggctgcttgt
cagaatggaatgaacatctacttctataccatcaagcccatccctgccaaccaagagctg
cttgtgtggtattgccgagactttgcagagaggctgcactatcccccctccagagagctg
acaatgatgaacctcacacaaacccacattaatccaaagcagcacagcactgataaagat
gagctttatcagaaaagcatcccaaagaaggagcacagtgtgaaagaaatcctgaaaatg
gaatcaaatcctcctaaaggaaaagacttctttcagaccaacatttcaccagttactcca
gaaaaagacttggatgatttacgtaagaactatagcccggagaggtgtttcttccctcga
gttgtctacccgatccgacctcacattccagaagactatttgaaagcttccttagcatac
agcatggacagacccagctacattactcactcgcccatccaggcatctactacaccaagt
ccttctgggaggagtagtccagaccaaagtttaaaaagttcaagtcctcacagtagtcca
ggggtcacagtttcacctctggcacctacttcccaagagcacagagagccatactcttac
ttgaacggatcatatggctcagaaggattggggtcttatcctggatatgcaccccctggc
cacctttcacctgcctttctaccgtcctataacccccattaccccaaattcctgttacct
ccattcaatatgagctgtaataacctgagcgctttgaacaatatcaatggcatcaacaat
ttcaatctcttcccaaggatgtaccctctttatggcaacctgctcagcggaggtagcctt
tcccaccacatgctcaaccccaccacgctccccagctcattgcccagtgaaggaggccgt
cgactgctgcagcctgatcatccgagagacttcctcataccagcacccaacagtgccttc
tctataacgggcgctgctgccagcatgaaggacaagccatgcagccctaccagtgggtct
cccaccgctggtacagcagccagttcagaacacataatgcaacctaaacctacctcagtg
gtgttggctgccaccggcggtgaagaagccatgaatctcattaaaagtaagaggaatgtg
accggttacaaaacactcccatacccactgaaaaagcagaatgggaagatcaagtacgaa
tgcaatgtttgctccaagacctttggccagctgtccaatctgaaggtgcacctccgagta
cacagcggagagagaccatttaaatgccagacttgcaataagggcttcacgcagctggct
cacctccagaagcactatctggtacacacgggagaaaaaccccatgagtgtcaggtttgt
cacaagcggttcagcagcaccagcaatctcaaaacccacctgcggctccactctggagag
aagccttaccagtgcaagctctgcccagccaaattcacccagtttgtgcacctgaagctg
cacaagcgtctccacacccgagaacgcccccataaatgcatccactgccacaagagctac
attcacctctgcagcctccaggtccacctgaagggcaactgccccgtcgccccagcttcc
ggcctctccatggaggacctgaacagaatcaatgaggagatcgagaagttcgacatcagt
gacaatgctgacaagctggaagaagtggaggacaatatcgacttaacatcgatcgtggag
aaggatatactgaccatgctcaggagggaaatggagggagctaatctgaaagtctctcta
cagaggaacctgggaaatgggcttatctcctcaggatgcaacctttacgagtcgtcagat
atgtcagttatgaagttgcctcacggtcacccactacctctgttacctgtaaaggtcaag
caagaaacaattgaaccaatggacccttaa
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integrated database retrieval system
