Pseudopodoces humilis (Tibetan ground-tit): 102112452
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Entry
102112452 CDS
T02921
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X2
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi02010
ABC transporters
phi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102112452 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102112452 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phi02000
]
102112452 (ABCA1)
Transporters [BR:
phi02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102112452 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
102112452
NCBI-ProteinID:
XP_005530990
LinkDB
All DBs
Position
Unknown
AA seq
2261 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDARRLLLYSQQDT
SIKDVQKVLGKLRKLGNSSGLDLKLRDFLTDNETFSDFLHHNVSMPSSAVEELLDAGVNL
QQVLVSGYRMRLRNLCNSSTSSEFLTIQNQTAAKDSEAFICTLSKEKLHATEQAFRANLN
PLKPLQRHLSFNSSLWDLSETVEVLRESFGKLVKELLSMKSWSDMRQEVMFLTNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVINFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAVRKVMSEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKGKALWDPHLPASNWTVEDVARFLSNSPEEFETENA
SVYTWVDAFNETDRAIQTISRFMECVNLDKLEPVPTEVRLINKSLELLDERRFWAGIVFT
EIAPDSTDLPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFVYLQDV
VEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLVPLLMSAGLLVLILKMGNLLPYSDPSVVF
IFLTIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDHISFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEEPQDRQHRHPDKKGSSEVCKEEEPVHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMATDV
GLPHKLKARTSRLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPESRETDLLSGMDGKGSYQMK
GWKLTQQQFMALLWKRMLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELQ
PWMYDEQYTFISNDAPEDAGTHKLLDALLDKPGFGTRCMQGHSIPDTPCTVGQKEWATAS
VPESVLDIFLKGNWSMENPSPSCECSSEKIKKMLPVCPPGAGGLPPPQREQDTADILQNL
TGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLMLPPSHEVTDAIKQVKK
ILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNGILRANLQQ
GENPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVVIIFICFQQKSYVSSSNLPVLAL
LLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLKDIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTKI
YRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILSN
IQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGEK
YAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFFG
HAFPGSVLKEKHRNMLQYQLPSSPSSLAKIFSILSQNKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHSKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacgcagctgggattgctgctatggaagaactttacctacagaagaaga
cagactttccagctgctgatcgaagttgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctatgagcagcatgaatgtcactttccaaataaagct
atgccttcagcaggaaccttgccgtggatacaggggatcatctgcaatgccaacaaccca
tgtttccgctacccaactcctggggaatcccctggaattgttggaaacttcaatgcctcc
attgtttcccgcctgttctcggatgccaggaggttactgttgtacagccaacaggatacg
agtataaaggatgtccagaaggtcctgggaaaactacgcaaattgggaaattcctctggc
ttagacttgaaacttcgggatttcctgactgacaatgagacattctctgacttcctccat
cataatgtgtccatgccatcatctgcagtagaggagctactggatgcaggggtaaatctc
cagcaggtccttgtgtctggttatcgaatgcgcctgcgaaatctctgcaatagctcaaca
tcgtctgaatttctcacgatccaaaatcagacagcagccaaggactctgaggccttcatt
tgcaccttgtcaaaggaaaaactccatgcaactgagcaagcctttcgtgctaacctgaat
cctttgaagcctcttcagagacacctttctttcaattcttccttgtgggatctgtcagaa
actgtggaagttttgagagagagctttgggaagcttgttaaagagctgctgagtatgaag
agctggagtgacatgaggcaagaggtgatgttcctgaccaatgtgaatgcctcaaactcc
tctacgcagatctatcaggctgtgtcacgcatcgtgtgcggccatcctgaaggtggaggg
ctcaaaatcaaatccctcaactggtatgaggataacaattacaaagcactgtttggaggg
aacagcactgaagatgatgtgattaacttctatgataactccacaacaccctactgcaat
gagctcatgaagaacctggaatctagcccgctttccaggattatctggagggcgttgaaa
cccttgctcattgggaagatcttgtacactccagatacaccagctgtaaggaaggtcatg
tctgaggtgaacaggacattccaggagctgggtgtgtttcgtgacctcgggggaatgtgg
gaggagataagcccaaaaatttggacatttatggaaagtagtcaggaaatggatctcatt
cggacgttgctgaaaggcaaagccctctgggacccgcacttgccggcttccaactggaca
gtggaggatgttgcccgtttcctgtcaaacagtccagaagaatttgagacagaaaatgcc
tctgtgtacacctgggtggatgccttcaatgagacagaccgggctatccaaaccatctcc
cgcttcatggagtgtgtcaacttggacaaactggagcctgtgcccacagaagtgcggctc
attaacaagtccttggagcttctggatgaaaggaggttctgggctggcatagtcttcact
gaaatagctcctgacagcacagaccttcctcaacatgtgaaatacaagatacgcatggac
attgataatgtggaaaggaccaacaagatcaaggatgggtactgggatcctggtccccgt
gctgaccccttcgaggacatgcgctatgtctggggaggctttgtctatctgcaggatgtg
gtagagcaagccatcatcagggttcagacgggcacggagaagaagacaggagtttatgtg
cagcagatgccctacccatgttacgtggatgacatatttctgcgcgtcatgagccgctcc
atgcctctcttcatgacactagcttggatctactcagtggctgtgataattaagggcatt
gtgtatgagaaggaagcccggctgaaagaaacaatgaggattatgggacttgacaatggc
atcctttggttaagctggttcattagcagccttgtccctctcctgatgagtgcaggactg
ctggtgctgatcctgaagatggggaatctgctgccttacagcgatcctagcgtggtgttc
attttcctcacaatcttcggtgttgtgactatcctccagtgctttctcatcagcaccgtg
ttctccagggccaacctggcagctgcctgtgggggcattgtctacttcacactgtacctg
ccttatgtgttgtgtgttgcctggcaggaccacatcagcttctcactcaagatttttgcg
agcctgctgtctccagtagcctttggtttcggttgcgagtactttgcactgtttgaggag
cagggagttggtgttcagtgggacaacttctttgagagcccattggaagaagatggcttt
agcatcacaacatcagctgtcatgatgctgtttgataccttcctgtatggagtcatgacc
tggtacattgaatctgtcttcccaggccagtatgggattcccagaccctggtactttcct
ttcacaaagtcctattggtttggggaggaaccacaggacaggcagcaccgccatcctgac
aagaagggatcttcagaagtctgcaaggaagaagagccagtgcatctgagtcttggtgtt
tccatccagaacctggtcaaggtttaccgtgacggcaagaaagttgctgtagatggtctc
acacttaacttctatgaaggacagatcacctcctttctgggacataatggagcagggaaa
accactaccatgtccattttgactggcttgttccccccaacctcgggtacagccttcatc
ctgggcaaagatatccgctctgagcttagcaccatcaggcagaacctgggtgtatgtcca
caacacaatgtgctgtttgacttgctgactgtggaggaacacatctggttctatgctcgg
ctcaaagggctgccggagaagaaggtgaaagaggagatggagcagatggcaacagatgtt
ggtttgcctcacaaattgaaagctaggacaagcaggctctctggtggcatgcagaggaag
ctctcagttgccttagcatttgtcggtggctccaaggttgtcattctggatgagcctaca
gctggggtagatccttattctcgcagaggaatatgggaactgcttctgaagtatcggcaa
ggtcgcactatcattctctctacgcaccacatggatgaggcagacattctgggggaccgg
attgccatcatttctcatggcaagctctgctgtgttggctcttctctcttcctgaagaac
cagctgggaacaggttattatttgaccctggtcaaaaaggatgtggattcctctctgagc
tcctgccgaaacagcagcagcacagtttcctatctgaaaaaggatgacagtgtctcccag
agcagctctgatgctggccttggcagtgaccatgaaagtgacacactgacaatagatgtc
tctgcaatttcaaatctcattacaaaacatgttcctgaggcaagactggtggaggacata
ggtcatgaattaacctatgtcttgccatacaaagctgctaaagagggagcttttgtggag
ctgttccatgaaattgatgaccgtctttctgatcttgggatttccagctatggcatctct
gaaactactctggaggagatcttcctgaaagtggctgatgatagtggtgtggatgcagaa
acctcagatggtacactgccagccagaaggaacagacgtgtgtttggagacagacagagc
tgccttcgtccatttacagaagatgatgcatttgatcctaatgactcagacatagatcca
gaatccagagagacagaccttctcagtggcatggatgggaaaggctcctaccagatgaaa
ggctggaagctcactcagcagcagttcatggctctgttgtggaagaggatgctaattgcc
aagagaagccggaagggcttttttgcccagattgtgctgccagctgtctttgtgtgtatt
gctctcatgttcagcctgattgttcctccttttgggaaatatcccagcctggaattacaa
ccctggatgtatgatgagcagtacacttttattagcaacgatgctccagaagatgcaggc
actcacaagcttttggatgcccttcttgataagccgggatttgggacacgctgtatgcag
ggacattccatcccagacactccttgcactgtggggcagaaggaatgggccactgcttca
gttccagagtcagtcctggacatcttcctgaaaggcaactggagcatggagaatccttcc
ccatcttgtgagtgcagcagtgagaagatcaagaagatgctgcctgtgtgcccccctggt
gcagggggtctgccacccccacagcgtgagcaagacacagctgacatcctccagaatctg
acaggacgcaatatatcagactacctggtgaagacctatgcgcaaatcattgggaaaagt
ttaaagaataaaatctgggtgaatgagttcagatatggtggcttttccttgggagccagc
agttccctcatgcttcctccaagccatgaagtcactgatgccattaagcaggtgaagaaa
attttggagctggcacagggaagttctggggatcggtttctcaacagcttatcaagtttc
atgaaaggcctggatacaaagaacaatgtgaaggtgtggtttaacaacaagggctggcat
gccattgcatccttcctaaatgtgatcaacaatggcatccttcgggccaacctccagcag
ggtgaaaaccccagtgcttatggaatcactgccttcaatcacccactcaatctcaccaag
cagcagctctctgaagtagctctgatgaccacctctgtggatgtcctcgtgtccatctgt
gtgatctttgccatgtcctttgttcctgccagctttgtggttttccttattcaggaacgt
gtcagcaaggctaaacacttgcagttcatcagtggtgtgaagcctgtgatctattggctg
gccaactttgtgtgggatatgtgcaactacattgttccagctacactagttgtcatcatc
ttcatctgcttccaacagaagtcctatgtatcctcctccaacttgcctgtgctggctctc
cttctgtttctctatggatggtccatcacccctctcatgtatccggcctcctttgtgttc
aaaatccctagcacggcatatgttgtgctgaccagtgtgaatctcttcattggcatcaat
ggaagtgtggccacctttgtcctggagctcttcaccaacaataagctgaaggacatcaat
gacatcctgaagtctgtctttctcatcttcccccacttctgtctgggccggggactcatt
gacatggtgaaaaaccaggctatggctgatgctttggagagatttggagaaaatcgtttt
gtgtcccctctgtcatgggacctggtgggaaggaacctctttgccatggcagtagaaggc
gttgtgtttttcctcattacagtgctcatccagtacaggttcttcatcaaacccaggcct
gtctatgccaagctgcctcctgtgaatgatgaagatgaggatgtaaccagagagaggcag
aggataattagtggaggaggacagagtgatattttggaaatcaaggagctaaccaagatt
tacagaatgaagagaaagccagcagttgataggatctgtgttggaatcccccctggagag
tgctttggactcctgggagtaaatggtgctggcaagtcatccacttttaagatgttaact
ggtgatacagatgtgacgggaggagaagctttcctcaaaggaaacagtatcttgtccaac
atccaagaagtccatcagaacatgggctactgcccacagttcgatgctgttaatgaactg
ctaacagggcgagaacacttggagttctttgcactcctgagaggtgttccagagaaagaa
gtctgcaaggttggtgagtgggcaattcggaaactgggcctcgtgaaatatggagaaaaa
tacgctgggaattacagtggagggaacagacgcaagctttccacagccattgccctcatt
ggcgggccacctgtggtattcctggatgagccaacaacagggatggatcccaaagcacgt
cgcttcttgtggaactgtgctctgagtgtaatcaaggaggggagatcagtggtgctcaca
tctcacagcatggaagaatgcgaagccctgtgcactcgaatggcgataatggtcaatggg
cggtttaggtgtctgggcagtgttcagcacctaaagaacaggtttggagatggctacacc
atagtggtgagaattgcaggagcaaacccagacctgaagcctgttgaggagttctttggg
catgccttccctggaagtgtcctaaaggaaaaacatcggaatatgctgcagtaccaactt
ccctcttcaccatcctccctggccaaaatattcagtattctctcccagaacaaaaagaga
ctccacatagaagactactccgtttctcagaccacacttgaccaagtttttgtaaatttt
gctaaggaccaaagtgatgacgaccattctaaggacctgtcattgcacaaaaaccagact
gtggtagacattgcaatccttaactccttcctgcaagatgagaaggtaaaagaaagttgt
gtgtga
DBGET
integrated database retrieval system
