Pseudopodoces humilis (Tibetan ground-tit): 102112531
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Entry
102112531 CDS
T02921
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102112531 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phi03041
]
102112531 (DHX15)
03009 Ribosome biogenesis [BR:
phi03009
]
102112531 (DHX15)
Enzymes [BR:
phi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102112531 (DHX15)
Spliceosome [BR:
phi03041
]
Complex A
U2 snRNP components
U2 related factors
102112531 (DHX15)
Complex B
102112531 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
102112531 (DHX15)
Ribosome biogenesis [BR:
phi03009
]
Eukaryotic type
90S particles
Helicases
102112531 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
Flavi_DEAD
AAA_25
AAA_29
Apis_Csd
Motif
Other DBs
NCBI-GeneID:
102112531
NCBI-ProteinID:
XP_005517856
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRTTDGKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLR
PSSNSTYYAAAGLPAIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDIL
IRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD
VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD
ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD
YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYS
TLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR
IRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSV
VLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQ
LAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNV
YHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR
KALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTC
TDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccatcgcctcgatctgggcgacgattatagctccagcaagaaacgcacc
accgacgggaaagatcgggaccgggacagggaccgagatgaccgttcgaaagatcgtgac
agggatcgtgacagagatagagatcgtgacagagaaagggacaaggaaaaagatctgcga
ccttcgtctaattctacatattacgcggctgctgggttaccagctataaaaccagcaatg
attccacacagtattaaccctttcacaaatctaccacataccccacgatattacgatatc
ctgaaaaaaaggctacaacttcctgtctgggaatataaagaaagatttacagatattttg
atcaggcatcagtcatttgtgctggttggagagactgggtctggtaaaacaacacagatc
cctcaatggtgtgttgactacatgcgctcgttacctggcccaaagaggggagtcgcatgt
acccagccccggcgagtggctgcaatgagcgtggcacagcgtgttgctgatgagatggat
gtcatgctgggccaggaggttggttactccattcggtttgaagactgcagtagcgcaaaa
accattttgaagtatatgactgatggtatgttacttcgtgaagcaatgaatgatcctttg
ctggagcgctatggtgttataattcttgatgaggcccatgagagaacactggctacggat
atcttgatgggagttttgaaggaagttgtaagacaaagatctgatttgaaggttatagtt
atgagtgctacgttagatgctggcaagtttcagatctattttgataactgtcctcttcta
actatcccgggtcgcacccatcctgtggagatattctatactccagaacctgaaagggac
taccttgaggctgccattcgaacagtaatacaaattcacatgtgtgaagaagaagaagga
gatctcttactctttcttactggacaagaggagattgatgaagcctgcaagaggataaaa
cgtgaaattgatgacttaggtcctgaagttggtgacataaaaatcattccattatattcc
acccttcctccacagcaacagcagaggatatttgaacctcccccaccaaaaaaacaaaat
ggagcaataggaagaaaggttgtcgtgtccactaacattgctgagacatcattgacaata
gatggtgtagtgtttgtgattgatcctggctttgcaaaacagaaggtgtacaatcctcgt
atcagggtggagtctctgttggtgactgcgatcagtaaagcgtctgcccagcagcgagct
ggccgtgctggtcgtactcgaccaggcaagtgcttcaggctttatacagagaaagcctac
aaaactgaaatgcaggacaacacataccctgaaattttgaggtctaacttaggatctgta
gtattacagctcaagaagcttggtatagatgatttggtgcactttgattttatggatcct
ccagctcccgaaactctgatgagagctttagagcttttgaattatctggctgctttaaat
gatgatggagacttgactgaattgggatccatgatggctgaatttccattggatccacag
ctggctaaaatggttattgcaagctgtgactacaactgttctaatgaggtcctatctatt
actgccatgttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagcagca
gatgaagccaagatgaggtttgcccacatagatggagatcatttgacgttgctgaatgtc
taccatgctttcaagcaaaatcatgagtcggttcagtggtgttatgacaacttcattaac
tacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggataga
tttaatttgcctcgtagaagcacagattttaccagccgagactattacatcaacataaga
aaggcattagttactgggtatttcatgcaggtggcacatttggagcgaacagggcattac
ttaacagtgaaagataaccaggtggtgcagttgcatccctccactgttcttgatcacaaa
ccagaatgggtgctgtataatgaatttgtccttacaacaaagaattacatccggacatgt
acagacatcaagcctgaatggctggtgaaaattgcccctcaatattatgacatgagcaat
tttccacagtgcgaagcaaagagacagttggatcgcatcattgccaaacttcagtccaag
gaatactcacagtactga
DBGET
integrated database retrieval system
