Pseudopodoces humilis (Tibetan ground-tit): 102112582
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Entry
102112582 CDS
T02921
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04140
Autophagy - animal
phi04142
Lysosome biogenesis
phi04148
Efferocytosis
phi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
102112582 (VPS11)
04140 Autophagy - animal
102112582 (VPS11)
04148 Efferocytosis
102112582 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102112582 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phi04131
]
102112582 (VPS11)
Membrane trafficking [BR:
phi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102112582 (VPS11)
Hops complex
102112582 (VPS11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
VPS18_solenoid_2nd
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
Beta-prop_WDR36-Utp21_1st
TPR_GEMI5
Beta-prop_WDR3_1st
zf-C3H2C3
zf-RING_5
zf-RING_UBOX
Beta-prop_IFT122_1st
zf-RING_11
zf-ANAPC11
zf_RING_Vps8_fungal
zf-C3HC4_3
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
102112582
NCBI-ProteinID:
XP_005531161
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MAAYLQWRRFVFFDRETVREPPGPDGASAKPFAVPPGIAVCDSGRGSLVFGDMEGQIWFL
PRSLQLSSFQAYKLRVTHLYQLKQHSILVSIGEDEEGINPLVKVWNLEKRDGGNPLCTRI
FPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTG
LAFRQSGKATHLFVVTTENIQSYMLSVKDYPHLELDTHGCGLRCSSLSDPSQDLQFIVAG
NECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGNEAQNSDKQVL
NIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEMLFRKNLFE
MAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQ
RIHNLTAYLQMLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVHFDVETAIKV
LRQAGYYSHAVYLAEKHEHHEWYLKIQLEDIKNYQEALHYIGRLPFEQAESNMKRYGKIL
MHHVPNETTELLKVLCTDYHPSGGNEGPGMLEGKKANSEEFIPVFANNSRELKAFLEHMT
EVQADSPQGVYDTLLELRLQNWAHEQDEQIKEKLHNEALTLLKSGRFKTVFDKALVLCQM
HSFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGEQEACLWEQALGYFARKEE
NCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSRQIEQDELR
IQKYREETTRIRLEIEDLKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSE
SDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTL
ITDLPSGKTATTIEAGLQRELLIHTKRST
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctacctgcagtggcgccggttcgtcttctttgacagggagacggtgagggag
ccgccggggccggatggggccagtgcgaagcccttcgcggtgcccccgggcattgcagtc
tgcgactcgggccggggaagcctcgtgttcggagatatggaaggtcagatttggtttttg
cctcgctcccttcaactcagcagtttccaagcttacaagctaagggtgacgcatctgtac
cagctgaagcagcacagtatcctggtttctattggtgaggatgaagagggtattaatcct
ttggtgaaagtctggaacctggagaaacgagatggtggtaatcctctttgcacacgaatt
tttccagcgataccgggtaacaagcccacggttgtatcctgcctaactgtccatgagaat
cttaatttcatggctatcggttttgcagatgggagtgttgtacttactaaaggagacatc
actcgagatcggcatagtaagacccagatcctacatgaaggcagttatccggttactggc
cttgcttttcgacagtctggcaaagcgacacatctatttgtggtgaccacagagaacatc
cagtcttatatgctttcagtgaaagactatcctcatctggagctggacactcacggttgt
ggattacgctgctcatctctcagtgacccctcacaggatctccagttcattgtggcagga
aatgaatgtgtgtacctttatcaaccagatgaacgtggcccctgctttgccttcgaggga
caaaagctaattgttcactggtatcgcgggtacctcatcattgtctccaaggaccgaaag
acttccccaaagtcagaatttgctgggaatgaggcacagaattcagacaaacaagtcctg
aatatctatgacttgtgcaacaaattcattgcatacagctccatctttgatgatatagtg
gatgtcttggcagagtggggttctctctatgtactgaccagagatgggaaaatccatgta
ctacaggagaaggatacacaaaccaaactcgagatgctgttcagaaagaacttatttgaa
atggccattaatctggccaagagccaccacttggacagcgatggtttgtcagagattttc
cggcagtatggagatcatctttataacaaaggaaaccatgatggagccatccagcagtat
atccgaactatagggaagctagaaccatcttacgttattcggaaattcctggatgctcag
cgtatccacaacctcactgcttatctacagatgctccatctgcagtccctggctaatgca
gaccacactacgcttctgctgaattgctataccaaactgaaagacagctccaaactggaa
gagttcattaagacaagtgagagtgaggtccactttgatgtagaaacagctatcaaggtg
cttcgccaagctggttactactcccatgcagtgtacctggcagagaagcatgaacatcat
gaatggtacctcaaaatccaattagaggacatcaagaactaccaagaggctttgcactac
attgggagactgccctttgaacaggcagagagtaatatgaagcgatatggtaaaatcctg
atgcaccatgtccctaatgagaccactgaattgctgaaggtcctttgtactgattaccat
ccctcaggaggcaatgaaggccctgggatgctggaaggaaaaaaggctaattcagaggag
ttcatcccagtctttgcaaacaactcccgagaactgaaagcttttctggagcacatgact
gaggtgcaggctgactctccacagggtgtctatgacaccttactggaacttcgattgcag
aactgggcacatgaacaagatgagcagataaaggagaagttgcacaatgaagccctcacc
ctcctgaagagtggaaggttcaaaacagtctttgataaagccttggtcttatgtcagatg
cacagtttcaaggatggtgttctctacctctatgagcagggcaaacttttccaacagatc
atgcactaccacatgcagaatgagcagtacaagaaggtgatcgaggtgtgcgagttgtat
ggtgaacaagaggcttgtctctgggagcaggctctcggctactttgcacggaaggaggag
aactgcaaagagtatattgctgcagtgctgaaacacattgagaacaagaatcttatgcct
ccactacttgttgtgcagacgctggctcataactccacagccaccctctctgtgattaag
gattatcttgtcaacaaactgcagaagcaaagtcgccagatagagcaagatgagctgaga
attcagaaatacagagaagaaactacgaggatccgtctggaaatcgaagacctaaaagca
agtcccaagattttccagaagaccaagtgtagcatttgcaccagtgcattggagctccct
tcagtccacttcttgtgtggtcattcctttcaccagcactgctttgaaagctactctgag
agtgattcggaatgtcctacttgcatgccagaaaatcgcaaagtaatggacatgatccga
gcccaggagcagaagagagatctgcatgaccagtttcagcatcagctcaagtgttcaaac
gatggcttctccgtcgttgccgactactttggtcgtggtgtcttcaataagctcaccctg
atcacagacttaccctcgggaaagacggctacgacgatcgaggctggcctgcagcgggag
ctgcttatccacaccaagcgcagtacctga
DBGET
integrated database retrieval system
