Pseudopodoces humilis (Tibetan ground-tit): 102112592
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Entry
102112592 CDS
T02921
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03015
mRNA surveillance pathway
phi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102112592 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102112592 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phi03021
]
102112592 (SYMPK)
03019 Messenger RNA biogenesis [BR:
phi03019
]
102112592 (SYMPK)
Transcription machinery [BR:
phi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102112592 (SYMPK)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
102112592 (SYMPK)
U7-dependent histone pre-mRNA processing factors
102112592 (SYMPK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Symplekin_C
Cnd1
PDS5
INTS7_N
Motif
Other DBs
NCBI-GeneID:
102112592
NCBI-ProteinID:
XP_014117876
LinkDB
All DBs
Position
Unknown
AA seq
1234 aa
AA seq
DB search
MAGGQEGPSPRPSEEEPGSDGRSTSERVVDLLNQAALIGNEGKITILKQVQELIINKDPT
LLDNFLDEIIAFQADKSIEVRKFVVGFIEEACKRDIELLLKLVANLNMLLKDENVNVVKK
AILTMTQLYKVALQWMVKSKVISELQEACWEMMSSMASDIILLLDSDNDGVRTHAIKFVE
GLIVTLSPRSGDSDVPKRSENDVSLERIPRDHPVIKYNVLWEEGKAALEQLLKFMVHPAI
SSINLTAALGSLATIARQRPMFMAEVIQAYETLHANLPPTLAKSQVSSVRKNLKLHLLSV
LRHPSSGDFQPQITTLLVDLGTPQAEIARSMPSPRDARKRPRDEPDAALKKMKIEPPLGE
DDEDKDLEAPAVAVAKAAGAAAVPSDTDITAEFLQPLLTPENVANLVLISMVYLPEAMPA
SFQATYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKLLREEPKEEKVAKPDAVL
IKRRLSALGQGQAIAVLGAHGSATALLDETPQAKRRPEPILPATQARLAGAGGRKKVFRL
SDVLKPLSEVQVEKLKLGAVRRILRSERAVAASGAAQARVKILAALVTQLEVPLKGEVLS
FILDDVRGRLDLAFAWLFQEYNAHLARGGGLERYDECLIGLLAGLQEKPDQKDGIFTKVV
LEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDLSSHEKDKV
RQQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAAPWTEEAIK
QCLYLYLALLPHNHKLIHELASVYTEAIADIKRTVLRVIEQPIRGMGMNSPELLLLVENC
PKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEKKEVIQALP
KLIKLNPIVVKEVFNRLLGTQHGDGASAVSPLNPGELLIALHNIDSSKCDMKSIIKELPQ
NSCKNPAGIAPKFTPKLVLKSPPGIPDVWKYPKVWEGFIKCCQRTKPQSFQVWKYPKVWE
GFIKCCQRTKPQSFQVWKYPKVWEGFIKCCQRTKPQSFQVVLQLPPPQLAAVFEKCPELR
EPLLSHVRALTPHQQAHIPLSTMAILEATTRHEPEGTPGEEKPPKREEDPKSKGVPGGGP
GSGSSPPEAPPELGGPDLEPPSIFISVPEDEESSGGGDASPPDSALETPNDPLAGSEPPQ
SEAPPCSPPSSEPPPPGTQSPEAPPPPPDGPAHP
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggccgggggtcaggaggggcccagcccccgccccagcgaggaggagcccgggagcgac
gggaggagcacctcggaacgggtggtggatttgctgaaccaggcggcgctgatcgggaac
gaggggaaaatcaccatcctgaaacaggtgcaggaactgatcatcaacaaggacccgacg
ctcctggacaatttcctggatgaaatcatcgcgttccaggccgataaatccatcgaggtg
aggaaattcgtggtgggattcatcgaggaggcctgcaaaagggacatcgagctgctgctg
aagctggtggccaacctgaacatgctgctcaaggacgagaacgtcaacgtggtcaaaaaa
gccatcctgaccatgacccagctctacaaggtggccctgcagtggatggtgaagtcgaag
gtgatcagcgagctgcaggaggcgtgctgggagatgatgtcctccatggccagcgacatc
atcctgctgctggactcggacaacgacggcgtgcgcacccacgccatcaagttcgtggag
gggctgatcgtgacgctgtccccgcgcagcggcgactccgacgtccccaaacgcagcgag
aacgacgtcagcctggagaggatcccccgggatcaccccgtcatcaagtacaacgtgctg
tgggaggagggcaaggcggcgctggagcagctgctcaagttcatggtgcacccggccatc
tccagcatcaacctgacggccgcgctcggctcactggccaccatcgcccgccagcggccc
atgttcatggccgaggtcatccaggcctacgagaccctccatgccaacctcccgcccacc
ctggccaagtcccaggtgagcagcgtgcggaagaacctgaagcttcacctgctgagcgtc
ctgcgccacccgtcctcgggggacttccagccgcagatcaccacgctgctggtggacctg
ggcacgccgcaggccgagatcgcccgcagcatgcccagcccccgcgacgcccgcaagcgg
ccccgcgacgagcccgacgccgccctcaagaagatgaagatcgagccacccctgggcgag
gatgacgaggacaaggacctggaggcgccggcggtggccgtggccaaagcggccggagcg
gccgccgtcccctcggacaccgacatcacggccgagttcctgcagccgctgctgaccccc
gagaacgtggccaacctggtgctgatcagcatggtgtacctgcccgaggccatgcccgcc
tccttccaggccacctacacgcccgtggagtcggccggcaccgaggcgcagatcaagcac
ctggcccgactcatggccacccagatgaccgcggccgggctggggccaggcgtggagcag
accaagctgctgcgtgaggagcccaaggaggagaaggtggccaagccggacgcggtgctg
atcaagcggcgcctgtcggcgctgggccagggccaggccatcgccgtgctgggcgcgcac
ggctcggccaccgcgctgctggacgagaccccccaggccaagcgccggcccgagcccatc
ctgccggccacgcaggcacggctggcgggcgcgggcggccggaagaaggttttccggctg
agcgatgtcctgaagccgctgagcgaggtgcaggtggagaagctgaagctcggagccgtc
cggcgcatcctgcgctccgagagagccgtggccgccagcggggccgcacaggcccgtgtg
aagatcctggccgctctggtgacgcagctggaggtgcccctcaagggcgaggtgctgtcc
ttcatcctggacgacgtccgtggccggctggacctggccttcgcgtggctcttccaggag
tacaacgcccacctggcccgcggcggtggcctggagcgctacgacgagtgcctgatcggg
ctgctggccggcctgcaggagaaacccgaccagaaggacgggatcttcaccaaggtggtg
ctggaggcgccgctgatcaccgagagcgccctcgaggtcatccgcaagtactgcgaggac
gagagccgcacctacctgggcatgtccaccttgcgggacctgatcttcaagcggccgtcg
cggcagttccagtacctgcacgtgctgctggacctcagctcccacgagaaggacaaggtg
cgtcagcaggccctgctgttcatcaagcgcatgtacgagaaggagcagctccgtgagtac
gtggagaagttcgccctcaattacctgcagctcctggtgcaccccaacccgccctcggtg
ctctttggggccgacaaggacacggaggtggcagctccctggaccgaggaggccatcaag
cagtgcctgtacctgtacctggccctgctgccccacaaccacaagctgatccacgagctc
gcctccgtctacaccgaggccatcgccgacatcaagcgcacggtgctgcgcgtcatcgag
cagccgatccgtgggatgggaatgaactccccggagctgctgctgctggtggagaactgc
cccaagggcgccgagaccttggtgacacgctgcctgcacagcctgacggacaaagtgcca
ccctcgccggagctggtcaagcgcgtcagggacctgtaccacaagcggctgccggacgtg
cgcttcctcatccccgtcctcaacggcctggagaagaaagaggtgattcaggcgctgccc
aaactcatcaaactcaaccccatcgtggtcaaggaggttttcaatcgtctgctggggaca
cagcacggtgacggcgcctcggccgtgtcccccctgaaccccggggagctcctgatcgcc
ctgcacaacatcgactcctccaagtgtgacatgaaatccatcatcaaagaattaccccaa
aattcctgcaaaaatcccgctggaattgccccaaaattcaccccaaaactggtcctgaaa
tccccccccggaattcccgatgtgtggaagtaccccaaggtgtgggaggggttcatcaag
tgctgccagaggaccaagccccagtccttccaggtgtggaagtaccccaaggtgtgggag
gggttcatcaagtgctgccagaggaccaagccccagtccttccaggtgtggaagtacccc
aaggtgtgggaggggttcatcaagtgctgccagaggaccaagccccagtccttccaggtg
gttctgcagctgcccccgccccagctcgccgccgtcttcgagaagtgcccggagctgcgc
gagcccctcctgagccacgtgagagccctcaccccccaccagcaagcgcacatcccgctg
tccaccatggccatcctggaggccaccacgcgccacgagcccgaggggacacctggagag
gagaagcccccgaagcgcgaggaggaccccaaatccaagggggtcccgggggggggtccc
ggctcgggctcctccccccccgaagccccccccgagctggggggtcccgacctggagccc
ccctcgatcttcatcagcgtccccgaggatgaggagagctcgggggggggcgacgcgtcc
cccccggacagcgccctggagacccccaacgaccccctggcgggctcggagcccccccag
agcgaagcccccccctgcagccccccctcgtcggagccgcccccccccggcacccagagc
cccgaggcgccccctcccccccccgatggccccgcccacccctga
DBGET
integrated database retrieval system
