Pseudopodoces humilis (Tibetan ground-tit): 102112725
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Entry
102112725 CDS
T02921
Symbol
ERCC3
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPB subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03022
Basal transcription factors
phi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102112725 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
102112725 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phi03021
]
102112725 (ERCC3)
03400 DNA repair and recombination proteins [BR:
phi03400
]
102112725 (ERCC3)
Enzymes [BR:
phi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
102112725 (ERCC3)
Transcription machinery [BR:
phi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102112725 (ERCC3)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102112725 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
102112725
NCBI-ProteinID:
XP_005519738
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MGRKERDKKKSKKRHYDDDEDDEDEGAGKEPQEAVPSAAGKQVEESGTKVDEYGAKDYRL
QMPLKADHSSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHIHEYKLTAYSL
YAAVSVGLQTSDITEYLQKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESTHPD
VIQQLLQDHVIKECRLRNAEGEETELITETFTSKSAISKSSEAGLGPSTSQGTDAQNKPD
VPADLFEFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVN
PDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLV
LGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEA
ERVMEWLKSQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFL
IGPKLYEANWMELQNSGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRA
CQFLIKFHERRNDKIIVFADNVFALKEYAVRLGKPYIYGPTAQGERMQILQNFKHNPKIN
TIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLV
SQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELSFSTKEEQQQLLQKVLQASDLD
AEEEVVAGEYGSKSAQVSRRTGTMSSMSGADDTVYMEYHSSRSKASTNKHIHPLFKRFRK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaaggagcgggataagaagaagtccaagaagcgccattacgatgacgacgaa
gacgatgaggacgaaggtgccgggaaggagccgcaggaggcggtgccgtcggcggcgggg
aagcaggtggaggagagcggcaccaaggtggacgagtacggcgccaaggactaccggctg
cagatgcccctgaaggccgaccacagctcgcggcccctctgggtggctcctgatggccat
atatttttggaagcattttctccagtttacaaatatgcccaggactttctggttgccatt
gctgagcctgtgtgcagacccacccatattcacgagtacaagctgactgcttactcccta
tatgctgctgtgagtgtgggcttacagacaagtgacatcactgagtatttgcagaaactc
agcaagactggtgtcccagatggaataattcagtttatcaagctgtgcaccgtcagctat
gggaaggtgaagttggttctgaaacataacaggtattttgtggaaagtacccaccctgat
gtcattcagcagcttctgcaagatcatgtaattaaagaatgtcgtctgagaaatgctgaa
ggtgaagagacagagctcattacagagacattcacaagtaaatcagcgatttccaaatcc
agtgaagctggccttggtccatcaacttcacagggaacagatgctcagaataagccagac
gtcccagctgacttatttgagttttatgaacagatggacaaagatgaagaggaggaggag
gaaacacagacagtgtcttttgaagtcaagcaggagatgattgaagaacttcagaagcgt
tgtatccatttggagtaccccttactggcagaatatgatttcagaaatgattctgtgaat
cctgatatcaatatagatttgaaacctactgcagttctgagaccttatcaagagaaaagc
ctaagaaagatgtttgggaatggacgagccaggtctggagttattgtcttgccatgtggt
gctggcaagtctctggtgggagtgacagctgcatgcactgtgcgcaagcggtgcctggtg
ctcgggaattccgccgtgtctgtggagcagtggaaggcccagttcaagatgtggtccacc
atcgatgacagccagatctgtcgcttcacatctgatgccaaagacaagcccattggctgt
tctgttgccatcagcacatactccatgttggggcacacgacaaaaaggtcttgggaagca
gaaagagtaatggagtggcttaaaagtcaagagtggggccttatgatactggatgaagtc
cataccatccctgcaaaaatgttcagacgtgtgctcactattgtacaagctcactgtaaa
ctggggctgactgctaccctggtcagagaagatgataaaattgttgacctgaacttcctg
attggaccaaagctctatgaagccaactggatggagctgcagaacagtggctacattgct
aaagtccagtgtgctgaggtctggtgcccaatgtcacctgaattttacagagaatatgta
gcaattaaaaccaagaaaaggatactgctctacaccatgaacccaaataaattcagagcc
tgtcagtttctgattaagtttcatgagcgacggaatgataaaatcatcgtctttgctgac
aatgtgtttgcactgaaggaatatgcagtcagacttgggaaaccctatatctatggtcct
actgcacaaggggaaagaatgcaaattctacaaaacttcaagcacaatccaaaaataaac
actattttcatctccaaggtgggggacacatccttcgatctgccggaagccaatgttctc
attcagatctcatcccatggtgggtcacgaaggcaggaggctcaaagactgggacgagtg
ctgagagccaaaaaaggcatggttgcagaggaatacaatgcctttttttattcccttgta
tcccaagacactcaggaaatggcatattcaacaaaacggcaacggtttcttgtagatcaa
ggttatagcttcaaggtaatcacaaagctggcaggcatggaagaagaagaactttcattt
tcaaccaaagaagagcaacagcagcttctccagaaagtcctgcaagcatctgacctggat
gctgaggaggaagtagttgctggagaatatggttcaaagtcagctcaggtgtcccgtcgt
acaggcaccatgagctccatgtccggagcagatgacacggtttacatggaataccactcc
tcacggagcaaggcttctactaacaaacacatccaccccctgttcaaacgcttccggaag
tga
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integrated database retrieval system
