Pseudopodoces humilis (Tibetan ground-tit): 102112859
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Entry
102112859 CDS
T02921
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phi03041
]
102112859 (DDX18)
03009 Ribosome biogenesis [BR:
phi03009
]
102112859 (DDX18)
Enzymes [BR:
phi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102112859 (DDX18)
Spliceosome [BR:
phi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102112859 (DDX18)
Ribosome biogenesis [BR:
phi03009
]
Eukaryotic type
90S particles
Helicases
102112859 (DDX18)
Pre-60S particles
102112859 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
102112859
NCBI-ProteinID:
XP_014104656
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MSVPAAASNLPMRLLRRKIHKRNLKLRQRNLKLRAAQGAVPSEGASQGPPEEEEVEVEEA
AVVPEVDVAAEEGAEPVDAAGPRSGEKKKKKKKKRKAAANGGDDTETKKAKSEEDDSAEV
EDGDKQDSGEKEVEEEEDEVPSLPLGVTGAFEDNSFASLAGSVSENTLKGINDMGFTHMT
EIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKLKFMPRNGTGVIILSPTREL
AMQTYGVLKELMNHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFM
YKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVEDLAKISLKKEP
LYVGVDDNKETATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYE
LLNYIDLPVLAIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDPP
DDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRYLKQARVPLSEFEFSWSKISDIQS
QLEKLIEKNYFLHKSAQEAYKAYIRAYDSHSLKQIYDVNNLDLPKVSLSFGFKVPPFVDL
NVNSNHGRRLQKRGGGGGFGYQKAKNVHKAKIFKHISKKSDNRQFSR
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgccggctgctgccagcaacctgcccatgcggctgctccgcaggaagatccac
aagcgcaacctgaagctgcggcagcgcaacctgaagctgcgggcggcccagggggcagtg
ccgagcgagggggcttctcagggacccccggaggaggaggaggtggaggtggaggaagcg
gcggtggtgccagaggtggatgtagcggccgaggagggcgcagagcctgtggatgcagcc
ggaccccgaagcggagaaaagaagaaaaagaagaagaaaaagagaaaagcggcggccaat
ggaggagatgatacagaaaccaaaaaagcaaaatcagaagaagatgattctgcagaggta
gaagatggagataagcaggactctggagagaaagaagtggaagaggaggaggatgaagtg
cccagtttgccactaggtgtaacaggtgcttttgaagacaattcctttgcttccctggct
ggttctgtcagtgagaatacattgaaaggcataaacgacatgggatttacacacatgact
gaaattcaacataaaagtattaagcctcttctagaaggcagggatattttagcagctgca
aaaacaggcagtggaaaaacacttgcatttctcattcctgcagtagagctcatctacaag
ctgaaattcatgcctaggaatggaactggtgttattattctttctcctactcgagagctg
gctatgcaaacctacggagttcttaaagaacttatgaatcatcatgttcacacctacggt
ctgataatggggggcagtaacagatcagcagaagcacagaagcttggaaatggaatcaac
atcattgtagcaacaccaggaagactgctggatcatatgcagaacactccaggtttcatg
tacaagaacttgcagtgtttggtaattgatgaggcagatcgaattttggaggttggattt
gaagaagaaatgaaacagatcataaaacttttaccaaagcgcagacagacgatgcttttc
tctgccacacaaaccagaaaggtcgaagatctggcaaagatctctctgaagaaagagcca
ctgtatgttggggttgatgataacaaggagacagcaacagtagacggtctggagcagggt
tatgtggtgtgtccatctgaaaaaagattccttttgctcttcacattcctcaagaagaac
cggaagaagaaactgatggtatttttttcttcatgtatgtcagtcaagtaccactatgaa
ttactcaactacattgatctgcctgttttggccattcatggcaagcagaaacagaccaaa
cgtactacaacatttttccagttctgtaatgcagagtctggaatactgctgtgcactgat
gtggctgccagaggactggatattcctgaggttgactggattgtccaatatgaccctcca
gatgatccaaaggaatatatccatcgtgttggtaggactgccagaggaataaacggtaga
ggacacgctctgctcattttacgaccagaagaactgggcttccttcgttatctgaaacaa
gccagggtaccgctgagtgaatttgaattttcttggtcaaaaatctcagatatccagtct
cagctggaaaaactgatagagaagaactacttccttcacaagtcagcccaggaggcttac
aaagcttacatcagagcttatgactcccattctctgaagcagatctatgatgtgaataat
ctggatcttcccaaagtcagcctttcatttggttttaaagttcctccatttgttgacctc
aatgtgaacagcaaccatggcagaagactgcagaaaagaggcggaggtgggggatttggc
taccagaaagcaaagaacgtccacaaagcaaaaatcttcaaacacatcagcaagaaatct
gacaatcggcagttttctcgttaa
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integrated database retrieval system
