Pseudopodoces humilis (Tibetan ground-tit): 102113152
Help
Entry
102113152 CDS
T02921
Name
(RefSeq) LOW QUALITY PROTEIN: extracellular matrix protein FRAS1-like
KO
K23379
extracelluar matrix protein FRAS1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04512
ECM-receptor interaction
phi04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102113152
04518 Integrin signaling
102113152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calx-beta
Cadherin_3
HemY_N
Motif
Other DBs
NCBI-GeneID:
102113152
NCBI-ProteinID:
XP_014116177
LinkDB
All DBs
Position
Unknown
AA seq
1620 aa
AA seq
DB search
MLTECSQSRLCSFPSLQTLPLLPAEPKGAELVVTAAPQRFQVDILPVDDGTPRVVTNLGL
QWLEYTDGKATNLITKKELLTTDPDTDDKQLIYEITAGPRNGHVENKLKLGTAVTTFTQE
DVNQGLIRYVAHEEKVQETADSFQFLVKDSKPNVVSGNVFHVQWSLLSFTHGSYEVRESA
GSVSVAVRRVGNLNQYSIVLCRTEQGTATAGATSRPGEQDYVEYAGQVQFEEREDTKACT
ITINDDDVFEGTEIFSVELSMPAYALLGNVTRATVTIADPEDEPTLQFDRSAFHVSESAG
LLSAPVQRKGDASSTVSAICYTIPKSAKGSGLHMLESGSDFKSRGLSDESRLILGPGVTL
VTCDVTLIDDSEYEEEEEFEVVLADASDNARIGSRASANVVIAGPNDASTVFLGNATFTV
SEAAGHIEIPVLRQGPDLSTPTSVWCATRTSDPPSASPGVDYVPSSRKIEFRPGKTEEFC
PLTILDDAQXPVIEGLETFVVYLSSPYGAELAKPFQAVVAINDIFQDVPSMQFTKDTYTA
KEKEGTLHIPIFHMGDLSYESSVRCYTWSQTAQVTEDFAERRDAEESRITFFKGEKVKNC
SVHISDDSAFEPEEQFQVCLGSPLGNHWSGARVGKMDVATITISNEEDAPTIEFEEAAYQ
VREPLGPEGVAVLNIPVIRRGDQNRTSKVRCSTRDGSAQAGVDYYPKSRMLKFSPGVAHI
MFKVEIMSNEDREWHESFSLVLGPDDPVEAVLGDTSTATVTILDQEAAGSLILPAPPVVV
TLADYDRVEEVTKEGAKKSPSPGYPLVCVTPCDPHFPKYALMKERCGEAGINQSSIQFSW
EVAAPTDGNGARSPFETITDNTPFTSVNHRVLDSIYFSRRFHVRCVAKAVDKAGHVGTPL
RSNVVTIGTDSAICHTPVVAGTARGFQAQSFIATLRYLDVKHKEHPNRIHISVQIPHQDG
MLPLISTLPLHNLHFLLSESIYRHQHVCSNLVTVRDLRGISEAGFLDEVTQGSFVLGPGY
DRPYQLDPAVREPKSIQLYQHLNLKSCIWTFDAYYDMTELIDVCGGSVTADFQVRDSAQS
FLTVHVPLYVSYICVTAPRGWASPEHHTEMEFSFFYDTVLWRTGIQTDSVLSARLQIIPV
CIREDGRLVIEFKTQAKFRGLFDMEHHRMHQDVRSSLITPEHLGGIEFALQLLWSARTFD
SPYQLWRATSSYNRKDYSGEYTIFLIPCTVQPTQPWAEPGAEPLPCPAHAPERFLIPIAF
QQTNRPVPVVRSLNTEFQLCNNEKVFLMDPTKSERSLAEMDYKGALSKGQILYGRVLWHP
EQNLNAAYKLQLEKVYLCTGRDGCVPFFDPTGTVYNQGPQYGCIQPHKYLKHRFLLLDRN
QPEVTDKYFHDVPFDAHFASELSEFHSVSSMPGVDGFTLKVDALYKVEAGHQWYLQVIYV
IGPEGTAGPRVQRSLGRRWQRGRRDLPGGAGRPVLDDPLIYDNEGDQLKNGTNMKSLLLE
REEAAVAASLSQAGASLGSAFAALTLLLLVLSGICLLARKCRRLRRKREAARAAPEELPL
NTKVELPRGAPTAAGSRCCTVRNLHPPRDSGGLCQGQGRRVKQVHLEVKVHSNLHDGTEV
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgctgactgaatgttctcagtcacgtctttgctccttcccctccctgcaaactctgccc
ttgctgccagcagagccgaagggagccgagctggtggtgacggcagcaccgcagcgcttc
caggtggacatcctccctgtggatgatgggacacccagggtggtcaccaacctgggcctg
cagtggctggagtacacggatggcaaggccaccaatctcatcactaagaaggaattactg
acgacagatcctgacacagatgacaaacagctgatctatgagataacagccggtcccaga
aatggccacgtggagaacaagctgaagctgggcacagctgtgaccacctttacacaggag
gatgtgaaccagggcctcattcggtacgtggcgcacgaggagaaggtccaggagaccgcg
gacagctttcagttcctagtgaaggacagcaaacccaacgtggtcagcggcaacgtcttc
cacgtccagtggtcccttctcagctttactcacggcagctacgaggtcagggagagcgcc
ggctccgtcagcgtcgccgtgaggcgggtggggaacctcaaccagtacagcattgtcctg
tgccgcaccgagcagggaacggccaccgctggagccacatcacggcctggggagcaggac
tacgtggagtatgcggggcaggtgcagtttgaggagcgggaggacaccaaggcctgtacc
atcaccatcaacgacgacgacgtgttcgagggcacggagatcttttccgtggagctcagc
atgccggcctacgccctgctggggaacgtcacccgggccaccgtcaccattgcggacccc
gaggacgagcccacactgcagttcgacaggagcgccttccacgtcagcgagagcgccggc
ttgctctcggctcccgtgcaaaggaaaggggatgccagcagcaccgtgtctgccatctgc
tacaccatccccaaatcggccaagggcagcggccttcacatgctggaatccggctccgac
ttcaagtcccgggggctgtcggatgagagccgcctcattttggggccaggtgtcaccctg
gtgacctgtgatgtcactctgatcgacgacagtgaatatgaagaggaagaggagtttgag
gtggtgctggccgatgcctcggacaacgcccgcatcggcagccgggcttcagccaacgtg
gtcatcgccggtcccaatgatgcctccacggtgttcctggggaatgccacctttactgtc
agcgaggctgcaggacacattgagatcccagtgctccggcagggacccgacctctccaca
cccacgtcagtgtggtgtgccactcggacgtcagacccgccctcggccagcccgggagtt
gattatgtccccagctccaggaaaatagagttcaggccaggcaagacagaagagttctgc
cccctgacaatcctggacgatgctcagtagccagtgatagaagggctggagacatttgtt
gtttacctcagctccccctacggagccgagctggcaaagccgttccaggccgttgtggcc
attaacgacattttccaagacgtgcccagcatgcagttcaccaaggacacctacacggcc
aaggagaaggaagggaccctgcacatccccatcttccacatgggggacctgagctacgag
tcctccgtcaggtgctacacatggagccagacggcgcaggtcacggaggacttcgcggag
aggagggatgcagaggagtctcgcatcaccttcttcaaaggggagaaggtgaagaactgc
agcgtccacatcagtgacgactctgccttcgaaccagaagagcagttccaggtctgtctg
ggtagcccccttggaaaccattggagcggagctcgggttgggaagatggacgtggcaacc
ataactatcagcaatgaggaagatgcccccaccatcgagttcgaagaggccgcgtaccag
gtgcgggagccgctgggcccggagggagtggctgtgctgaacatcccggtgatccgcagg
ggcgaccagaacagaacctccaaggtgcgctgcagcacccgcgacggctcggcacaggcc
ggcgtggattactaccccaagagtcggatgctcaagttcagcccaggcgtggcccacatc
atgtttaaggtggaaatcatgtccaacgaagaccgggagtggcacgagtccttttctctg
gtgctgggcccagatgatcctgtggaagcagttctaggagacaccagcactgccacagtg
actattttggatcaggaggcagcggggagcctgattctcccagcacctcccgtggtggtc
accctggctgactacgaccgcgtggaagaagtgaccaaggagggtgctaagaaatccccc
tccccgggctaccccctcgtctgtgtcactccctgtgaccctcacttccccaagtacgcc
ctgatgaaggagcgctgcggcgaggccgggatcaaccagtcttccatacagttcagctgg
gaagtggccgcccccacggacgggaacggagcccgctcgcctttcgagaccatcacggac
aacacgcccttcaccagcgtcaaccacagggtgctggacagcatctacttcagccggcgg
ttccacgtgcgctgcgtggccaaggctgtggacaaggctggccacgtggggacccccctg
aggagcaacgtggtgaccataggcacagacagtgccatctgtcacacgccagtggtggcg
gggacggcccgaggcttccaggcacagtccttcattgccacgctccggtacctggatgtg
aagcacaaggagcatcccaacaggatccacatctcggtgcagatcccccaccaggatggg
atgctgcccctcatctccacgctgccgctgcacaacctgcatttccttctctccgagtcc
atctacaggcaccagcacgtctgctccaacctggtcactgtcagagacctcaggggcatc
tcagaggcagggttcctggacgaagtgacccagggcagcttcgtgctgggcccgggctac
gaccgcccctaccagctggaccccgcggtgagggagcccaagagcatccagctgtaccag
cacctcaacctcaagagctgcatctggaccttcgacgcttattacgacatgaccgagtta
attgatgtctgtgggggctctgtcaccgctgacttccaggtaagggactctgcccagtcc
ttcctgacagtccacgtccctctctacgtgtcctacatctgtgtgacggcaccgaggggc
tgggcttccccggagcaccacaccgagatggagttctccttcttctacgacaccgttctc
tggaggacagggatccagacggacagcgtgctctcggcccgcctgcagataatccccgtc
tgcatccgcgaggacggacggctggtcatcgagttcaagacgcaggccaagttcagaggg
ctgtttgacatggagcaccacaggatgcatcaggatgtcaggtcctctttgataactcca
gagcacctgggaggcatcgaatttgccctgcagctgctgtggagtgctcggacttttgat
tctccctaccagctctggagagcaaccagctcctacaacaggaaggattactctggagaa
tacaccatcttcctgatcccctgcacggtgcagcccacgcagccgtgggcagagcctgga
gccgagcccctgccctgcccggctcacgctcccgagcggtttttgatcccgatcgccttc
cagcagacaaaccgcccagttccggttgttcgctccctgaacacagagtttcagctctgt
aacaacgagaaagtttttctaatggaccccaccaaatcggaaaggtctctggcagaaatg
gattacaagggggctttatccaaggggcagatcctgtacgggcgcgtgctctggcacccg
gaacaaaacctcaacgccgcttacaagctgcagctggagaaggtctacctgtgcacaggc
agggacggctgcgtgcccttcttcgaccccacgggcaccgtctacaaccaggggccccag
tacggctgcatccagccccacaagtacctgaagcaccgattcctcctcctggaccgaaac
cagccagaagtgacggataagtacttccacgatgtgccttttgacgcccacttcgcttct
gagctgtccgagttccactcagtgagcagcatgcccggagttgatggatttactctcaag
gtggatgctctctacaaggtggaagctgggcaccagtggtacctccaagtgatctacgtg
atcggcccggagggcacggccgggccccgtgtccagcgctccctggggcggcgctggcag
cgcggccgccgggacctgcccgggggggccgggaggccggtgctggatgaccccctcatc
tacgacaacgagggcgaccagctgaagaacggcaccaacatgaagtcgctgctcttggag
agggaagaagctgccgtcgcagcctccttgtcccaagcgggcgcttccctgggcagcgcc
ttcgccgccctcaccctgctgctgctggtgctgtccggaatttgcctcctcgccaggaag
tgccggcggctgcggaggaagcgggaggcggccagggccgctcccgaggagctccccttg
aacaccaaggtggagctgccccggggcgccccgacggcggcgggcagccgctgctgcacc
gtcaggaaccttcatccaccgagggacagcggcggcctctgccagggccagggcaggaga
gtgaagcaggtgcacttggaagtcaaagtccacagcaatttgcacgacggcacggaagtt
taa
DBGET
integrated database retrieval system
