Pseudopodoces humilis (Tibetan ground-tit): 102113163
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Entry
102113163 CDS
T02921
Symbol
PCDH17
Name
(RefSeq) protocadherin-17 isoform X2
KO
K16499
protocadherin delta 2
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phi04515
]
102113163 (PCDH17)
Cell adhesion molecules [BR:
phi04515
]
Cadherins
Protocadherins
102113163 (PCDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
102113163
NCBI-ProteinID:
XP_005516464
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MYLSICCFFFCWAPALSLKNLNYSVPEEQGAGTVIGNIGRDARLAAGTAGGGMLPAERGV
PGGGPGRGPKSTFRVLENSAPHLLDVDGESGLLYTKQRIDREALCRRSAKCQLSLEVFAN
DQEICMIKVEIQDLNDNAPSFPSDQVDMDISENAAPGTRFPLTSAHDPDAGDNGLRTYLL
TRDDYGLFSLDVKSRGDGTKFPELVIQKPLDREEQSHHTLVLTALDGGDPPRSGTVQINV
RLIDSNDNSPIFEAASYVVELPENAPLGTAVIDLNATDADEGTNGEVLYSFSGYAPERVR
DLFSIDPQSGLIRVKGNLDYEESGLIEIDVQARDLGPNPIPAHCKVTVRLIDRNDNAPTI
GFVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGGPGAVPFTLEENYDN
FYTVVTDRPLDREAQDEYNVTIVARDGGNPPLNSTKSFSVRILDENDNPPRFSKNLYVLQ
VPENNIPGEYLGSVLAQDPDLGQNGTVSYSILPGHVGDVSIYTYVSVNPTNGAIYALRSF
NYEQTKHFEFRVLAKDSGSPHRESNATVRVTVLDVNDNAPLIVLPALINDTAELQVPRNA
GVGYPVGTVRALDSDFGESGRLTYEIVEGNEEHLFEMDPTSGEIRTLHPYWEELSPVAEL
VVKVSDHGKPSLSAVAKLIVRALAGPLPEAGEPQVNGEQHRRPHWDLSLPLIVTLSTVSI
ILLAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGGGSGGGGGGSGSGGGKGKKKKI
SKNDIMLVPSEGEDSRGPLNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASN
NLTVPQGHVGCHTSFTGQGTNASEAPPSRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKD
PERASLRDSGHGDSDQADSDQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEQEECVNCT
DECRVLGHSDRCWMPQFPAASQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTF
GKDKREHTILIANVKPYLKAKRALSPLLQEVPSASSSPTKTCIEPCTSTKGPLDGCEVKS
GALAEPSSQYLSADSQYLSPSKQSKDASFIASDQMARAFADVHSRVSRDSSEMDSVLEQL
DRSARDLGRESVDAEEVVREIDKLLQDCRGSDPVAIRK
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatttgttgcttcttcttctgctgggctcccgccctctcgctaaagaat
ctgaattactcggtgccggaggagcagggagcgggcacggtcatcggaaacatcgggcgc
gatgcgcggctggcggcaggcacggcgggaggcgggatgctgcccgcggagcgtggcgtt
cccggtggcggccccggccgcggccccaagtccaccttccgggtgctggagaattcagcc
ccgcacctcctggacgtggacggggagagcgggctgctgtacaccaagcagcgcattgac
cgtgaggcgctgtgccgacgcagcgccaagtgccagctgtccctcgaggtgtttgccaat
gaccaggagatctgcatgatcaaagtggagattcaggacctgaacgacaacgcaccatca
ttcccctctgaccaagtggacatggacatctcggaaaatgctgcaccaggcacccgcttc
cccctcacgagcgcccacgacccagacgctggggacaatggactgcggacctatctgctc
actcgtgacgactacggcctcttctctcttgatgtgaagtcccgtggtgatggcacaaag
tttccagagctggtcatccagaagccattagaccgtgaggagcagagtcaccacaccctg
gtgctgacggcattggatggcggtgacccaccacgctcgggcacggtgcagatcaacgtg
cgcctcattgactccaatgacaacagccccatctttgaggcagcctcctacgtggtagag
ctgccagagaacgcaccactaggcacggcagtcatcgacctcaatgccactgatgccgat
gagggtaccaatggagaggtgctctactcctttagtggctatgcacctgagcgtgtccgc
gacctgtttagcatcgacccgcaaagtggcctcatccgtgtcaagggcaacctggactat
gaggagagtggcctcattgagattgatgtccaagctcgggacctggggcccaatcccatc
cctgctcactgcaaggtcactgtccgcctcatcgaccgcaatgacaatgctcccaccatt
ggctttgtttccgttcgccagggagctctgagtgaggctgccccaccaggaactgtcatt
gccctggtgcgggtcaccgaccgtgattcaggcaagaatgggcagctccagtgtcgggtg
ctgggcggtggcggcgggcccggtgctgttcctttcaccctggaggagaactatgacaac
ttctacactgtggtcactgaccgacccctggaccgtgaggcacaggacgagtacaatgtg
accatcgtggcacgtgatgggggcaatcccccacttaactccaccaagtcgttttctgtc
cggatccttgatgagaatgacaacccaccccgtttcagcaagaatctttatgtgttacag
gtgcctgagaacaacatccctggagagtacctgggctcagtcttggcccaggatcctgac
ttgggccaaaatgggacagtgtcttattccattctgcctgggcatgtgggagatgtctcc
atctacacctatgtctctgtcaaccccacaaatggtgctatttatgccctgaggagcttc
aattatgagcagacaaagcactttgagttccgcgtgctggccaaagactcgggttcaccc
caccgtgaaagcaatgccacagtgcgtgtcaccgtgctcgacgtcaacgataatgcaccc
ctcatcgtcctgcctgccctcatcaatgacaccgctgagctgcaggtgccacgcaatgct
ggggtgggctaccctgtgggcaccgtccgtgccctggacagtgactttggggagagtggg
cgcctcacatacgagattgtggaaggcaatgaggagcacctctttgagatggaccccact
agcggtgagatacgcaccttgcacccttactgggaggagctcagccctgtggctgaactg
gtggtaaaagtcagtgaccatggcaagcccagcctctccgctgtggccaagctcatagtc
agggccttggcagggcccctgcccgaggctggcgagccgcaggtgaatggcgagcagcat
cggcggccacactgggacttgtcgctgccgctgattgtgacgctgagcactgtctccatc
atcttgctggctgccatgatcactattgctgtgaagtgcaagcgagagaacaaggagatc
cgcacctataattgtcgcattgccgagtatagccaccctcagctgggaggagggggaggc
agtggcgggggaggaggaggcagtggcagtggagggggcaagggcaagaagaagaagatc
agcaagaatgacattatgctggtgcccagtgagggcgaggacagccggggtcccctcaat
gtcatgaacgtggtgagcagcccatccctggccacctcacccatgtactttgactaccag
acccgcctgcccctcagctctcccaggtctgaggtgatgtacctgaagcccgcctccaac
aacctgaccgtaccccagggacatgtgggctgccacaccagcttcacagggcaagggact
aacgccagcgaggctcccccgagccggatgtccataattcagacagacaattttcccgca
gagcccaattacatgggcagcaggcagcagtttgttcaaagtagctccacgttcaaggat
ccagaaagagccagcttgagggacagcgggcatggggacagtgatcaggctgacagtgac
caagacactaacaaaggctcctgctgtgacatgtctgttagggaggcactcaagatgaaa
actacttcaactaaaagccagccacttgaacaagaacaagaagaatgtgttaactgcaca
gatgaatgcagagtgcttggtcattctgacaggtgttggatgccacagttccctgcagcc
agtcaggctgagaatgcagattatcgcacaaatctctttgtacccacagttgaagctaat
gttgagactgagacatatgaaactgtgaatcccactgggaaaaagactttttgtacattt
gggaaagacaagagagagcacactattctcattgccaatgttaaaccttacttaaaagcc
aaacgtgccctgagtcctctgcttcaggaggttccctcagcatcgagcagcccaaccaag
acatgcattgagccttgcacctcaacaaaaggaccactggatggttgtgaagtgaaatca
ggagccttggctgaaccaagcagccagtacttgtcagctgacagtcagtatctatcgccc
agtaaacagtcaaaggacgcttccttcattgcatcagatcagatggctagggcctttgca
gacgtgcattcccgagtgagccgagactcgagtgagatggactctgttctggagcagtta
gaccgctcagcccgggatctaggcagggagtcggtggatgccgaggaagttgtgagagaa
atagacaagctcttgcaggactgtcggggaagcgaccctgtggccatcagaaagtga
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