Pseudopodoces humilis (Tibetan ground-tit): 102113230
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Entry
102113230 CDS
T02921
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102113230 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phi03400
]
102113230 (RAD54B)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
102113230 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
Motif
Other DBs
NCBI-GeneID:
102113230
NCBI-ProteinID:
XP_005517078
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MRRSAAPSQVLGNAGKKPRFIPPGKCIAAFLKNETKEMDQEIKLKEIDEKEGGASLLSKT
NVQNQNENFTQFVESTGKVKTKACSSTDKCNKAEMKTLKVSKADALCLPTSRTAKEEAVQ
EAPDCLVKYFSVVWCKASKKKHKKWEGDAILITKGKSVILKDTEGKDIGRGTGYKAKELD
SLDEGQTLMVGGKEIEVMGVISADDFSSGRCFQAGIGTHDTDATALSQTNTKPFCKPFKN
VCQPSTKENMLRDSQSCKPRHDPNASNSLVMPRPNASHQWMFNKAGLPVVDVVVDPYIAS
NLRPHQKEGIIFLYECVMGMRVSGRFGAILADEMGLGKTLQCIALVWTLLRQGPYGCKPV
LKRALVVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDHKVEEFMGSPLYSVMIISYEMLL
RSLDQIQAVEFNLLICDEGHRLKNSTIKTTTALTSLSCERRIILTGTPIQNDLQEFYALI
EFVNPGILGSLSTYKKIYEEPIVRSREPSATEEEKELGEKRAAELTRLTGLFILRRTQEV
INKFLPPKKESIIFCRPTTLQLELYRKLLSSHIITSCLQGRLENSPHLICIGALKKLCNH
PCLLFKAIKEKSCDPMSEEYDESSLYEGVIDVFPQDYTSDTFSETDSGKLQVLVKLLAAI
HELNSSERVVLVSNYTQTLNVLQDVCKHYGYSYTRLDGHTPVSQRQHIVDTFNSKFCSAF
IFLLSSKAGGVGLNLVGASHLVLYDIDWNPATDIQAMARVWRDGQKHTVHIYRLLTTGSI
EEKIYQRQISKQDLSGAVVDLSKTSEHTHFSVEELKNLFTLHEDSSCVTHDLLECDCMGK
IDHQNTSSEKPPISRSCQLEQNSRKPLSMSQLMQWKHFSGQHQTLADPFLERIKENVSFI
FQNVTNPTSPPNKT
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgatctgcagctccaagtcaagtcctaggaaatgcaggcaaaaagccaaggttt
ataccaccaggaaaatgtattgctgcttttctcaagaatgaaactaaggagatggaccaa
gaaattaagttaaaggagatagatgagaaagagggaggtgcttcattgctgtctaaaaca
aatgtccagaatcaaaatgaaaattttacacagtttgtggagtcaactggaaaagtaaag
acaaaagcatgttccagcactgacaagtgtaacaaggcagaaatgaaaacgttgaaagtg
tccaaagctgatgcactgtgtttgccaacatcaaggactgcaaaggaagaagcagttcag
gaagcacctgactgccttgtgaaatatttcagtgtcgtgtggtgtaaggcatcaaagaaa
aagcacaagaagtgggaaggcgatgctattcttattacaaaaggaaagtcagtaatattg
aaagatacggaaggcaaagacattggcagaggtactggatataaagctaaagagctggac
agtctcgatgaaggtcaaacactgatggttggcggaaaagaaattgaagtgatgggtgta
atttcagcagatgatttcagcagtggcaggtgttttcaggctggaatagggactcatgac
acagatgcaactgcattatctcagactaatacaaaaccattctgtaaaccattcaaaaat
gtctgtcaacccagtactaaagagaatatgctcagagattctcaaagctgcaaacctcgc
catgatccaaatgcttcaaattctctagttatgccacgaccaaatgcaagtcatcaatgg
atgttcaataaggctggtttacctgtggtggatgtagtcgtagatccttacattgcaagt
aatctccgcccacaccagaaagaaggaattatatttctatatgaatgtgtaatgggaatg
agagttagtggcagatttggagctattcttgctgatgagatgggcttaggaaaaaccctg
caatgcattgcacttgtctggactcttctgcgtcaagggccctatggatgcaaacctgta
ctaaagcgagcactggtagtcacccccgggagtctggtgaaaaactggaaaaaagagttt
cagaaatggttgggaagtgaaaggatcaaagtctttacagttgatcaggaccacaaagta
gaagaattcatgggttctccactttattcagttatgataatcagttacgagatgctattg
cgatctttggatcaaattcaggctgtagaatttaacctcctcatctgtgatgaaggacat
cgtctgaaaaatagcactattaagacaactacagcccttactagtctatcttgtgagagg
agaattattcttactggtactccgatccaaaatgacttgcaagaattttatgcattaata
gagtttgtgaatccaggaatactcggttctttatccacatataaaaagatatatgaggaa
ccaattgtcagatctagagaaccttcagcaacagaggaagaaaaggaattaggagaaaaa
agagcagcagaactcacacgcctcactggactctttattctaagaagaacacaggaggtt
ataaacaaatttctgccccccaaaaaggagagcataatcttctgccgaccaacaacactg
cagcttgaattgtatcgaaaactgcttagttctcatattattacatcctgtctgcaaggc
aggctggaaaatagtccacacctaatatgtataggagctttgaaaaaactttgcaatcat
ccatgtcttctgtttaaagctataaaggagaaaagctgtgatcctatgtctgaggaatat
gatgagtccagcctctatgaaggtgtaatagatgtcttcccacaagattatacttcagat
actttctctgaaactgactcaggaaaattgcaggtgctggtgaagttgttagcagcaatc
catgagctcaactcttctgaaagagttgtgttggtatccaattacactcagacattaaac
gtattacaagacgtatgcaaacattatggatactcctatactagacttgatggacatact
cctgtctcccagagacaacatattgtcgatactttcaacagtaaattctgctcagctttt
atctttttgctgagttcaaaggctggtggagtgggattgaacctggttggagcatctcat
ttggtcctgtatgatatcgactggaatccagctacagatattcaggcaatggctagagtg
tggagggatggtcagaaacatactgtccatatctacaggctgctaaccacaggctcaata
gaagaaaagatttatcagcgacagatcagcaaacaagacctttctggggcagttgtagac
ctttccaagacatctgaacacacacatttttctgttgaggagcttaaaaatctctttact
ctacatgaagattccagctgtgttactcacgacttgcttgagtgtgactgcatgggaaag
attgaccatcaaaatacttcctcagaaaagcctcccatatctaggagctgccagcttgaa
caaaattcaaggaaaccactttccatgtcacagttgatgcaatggaagcatttctctggg
caacatcagactctggctgatcctttccttgaaaggataaaagagaatgtttctttcatt
ttccagaatgtaaccaatcctacttccccacctaataaaacttga
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