Pseudopodoces humilis (Tibetan ground-tit): 102113237
Help
Entry
102113237 CDS
T02921
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102113237 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102113237 (CNOT10)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102113237 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
ARM_TT21_N
TPR_8
ARM_TT21
TPR_7
TPR_MalT
EMP24_GP25L
TPR_17
BLOC1_2
DUF6058
DUF948
Motif
Other DBs
NCBI-GeneID:
102113237
NCBI-ProteinID:
XP_005519035
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MAADKAADQGTEKHEGAGTSGITDQEKELSSSALQAFQAGNYDACLQHLNTLQDINKDDY
KITLNTAVAEFCKSNQTTTDNLRQTLNQLKNQVHSVVEEMDGLDDVENSMLYYNQAVILY
HLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTYQAEKALHLLAVLEKMISQ
GNNNSKNGKSESGNNTNKDSSNQKAESGALIEVAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTGECLRCMFWNNLG
CIHFAMGKHNLGIFYFKKALQENDNACAQLGTGSSDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQEPK
QENGSKTSNQLGGNTENTESSEACSNKSHEGDKFIAAPPSSPLKKQELENLRCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEYD
KARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKTLSDMRK
KPVFQPVHSIQPIQMPAFTTVQRK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacaaggctgcggatcaaggcactgaaaaacatgaaggagcgggtacttct
gggattactgatcaggaaaaggaattgtcgagcagtgcattacaagcttttcaggctgga
aactatgatgcttgtttacaacacctaaatacccttcaagacataaacaaagatgactac
aaaataactttgaatactgctgttgcagagttctgtaaaagtaatcagactaccacagac
aatttgagacaaacccttaaccagctgaaaaaccaggttcactctgttgttgaagaaatg
gatggtttggatgatgttgagaacagtatgctgtactacaatcaagctgttatcctgtac
catctgcgtcagtatactgaagctatatccgttggggagaagctgtaccagttcatagag
ccttttgaagagaaatttgcccaggctgtatgcttcttgcttgtagacttatacctgtta
acttaccaagctgagaaagccttgcatctgcttgctgttctggaaaaaatgatttcacag
ggcaacaataacagcaagaatggaaaaagtgagtcaggtaataatactaataaagattcc
tcgaatcaaaaagctgaaagtggagctttaatagaggttgctaaatctaagatacatcag
tataaggtgagagcctatatccagatgaagtcattaaaagcatgcaaaagggagatcaag
tcagttatgaatacagctggaaattcagctccttctctctttcttaagagcaattttgag
tatttgagaggcaattaccgtaaagctgtcaaacttttaaatagtgccaacattgctgag
catccaggcttcatgaaaacaggtgaatgcttaaggtgtatgttctggaacaatcttggc
tgcattcactttgcaatgggaaaacacaatttaggaattttttactttaaaaaagcgttg
caagaaaatgataatgcatgtgcacagctgggaacgggcagctcggatccaggtaaaaaa
ttttcagggagacccatgtgtacactactgactaacaaacgatatgagttgctctataac
tgtggaattcagctcttgcatattgggaggcccttagctgcctttgaatgcctgattgag
gcagtccaggtttatcactcaaaccctcgtctgtggctgagaatagcagaatgctgcatt
gctgccaataaagggacatcagaacaagagactaaaggtcttcccagcaaaaagggaatt
gtgcaatcaatagtaggtcaaggctaccaccgtaagatagtcctagcatcccagtccata
cagaatgttgtttataatgatgggcagtcctcagcaatacctgtagccagcatggagttt
gcagcgatttgtctaagaaatgccttgctgctactgccagaagatcaacaggagcccaag
caggaaaatggatctaaaacaagtaatcagctggggggaaatacagaaaacactgaaagc
agtgaagcatgcagcaataaaagtcatgaaggggataaattcattgcagctcctccttct
tcacctttgaagaaacaggaattggagaatttaaggtgctcgatccttgcgtgtagtgct
tacgtggctctggctttgggggataaccttatggcattgaatcatgcagataaacttctg
cagcaaccaaagctctcagggtctcttaagtttctcgggcatttgtatgcagcagaagct
ctcatctctctagacagaatatctgatgccatcactcacttgaaccctgagaatgtcact
gatgtttcccttgggatctcttcaaatgagcaggatcaagggtctgacaaaggagagaat
gaggcaatggaatcttctggcaagcagacaccacagtgttaccccagttcggtcacatct
gcacgaacaatgatgttatttaaccttggaagtgcttactgcttgaggagtgaatatgat
aaggctcgaaagtgtcttcatcaggctgcttcgctgatccaccccaaagagatccctcca
gaggccatcctgctggctgtgtatcttgaattgcagaatggtaacacgcagctggcactg
cagatcatcaagaggaaccagctgctcccttctgtgaaaacactatctgacatgcggaaa
aagcctgttttccagccagtccactcgatccagcccattcagatgccagctttcaccact
gttcaaaggaagtga
DBGET
integrated database retrieval system
