Pseudopodoces humilis (Tibetan ground-tit): 102113477
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Entry
102113477 CDS
T02921
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102113477 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phi03021
]
102113477 (POLR1A)
Enzymes [BR:
phi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102113477 (POLR1A)
Transcription machinery [BR:
phi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
102113477 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
HMG_box
DUF7708
Motif
Other DBs
NCBI-GeneID:
102113477
NCBI-ProteinID:
XP_014118636
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MRPPKVVPWRRLVGVSFGMYTADEIRKLSVKPITNPQYLDNVGNPAVSGLYDLALGPPDS
KEVCATCMQNFSNCPGHFGHIELPLTVYNPLFFDKLYLLIRGSCLNCHMLTCPRAVVHLL
LSQLKVLEKGLLHAVHDLEIILNRFIEQCADATGSEIEEELNRHVQEMLQSSQIRDRCSN
VKNVCECRNKLISQFWKSHMGSKKCPNCKSRRSLVRKEHNSKLTVTYPSTMCHKSGEEGI
LDETAGIDESQLGKRGYLTPMTAKDYILALWKNEGFFLRYLFPGMDPHESSGFSPDLFFL
DLLVVPPSRYRPVNRVGDRLFTNGQTVNLQAVIKDAQLIRKLLVFMAKEQCQPIKITEEI
QTATGGDSESLDHSVLTTIPGQSIADKLYNTWIRLQSHVNIVFDSDMDKLITEKYPGIRQ
LLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKE
LRQAVINGPKVHPGASMVINEDGSRTVLSATSLTQREAIAKQLLTPSSGAPQTGLKIVCR
HIKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYTLAFTDEQYLVPKDGKPLPGLIQDHMISGVSMTIRGCFFTREQYMELVYRG
LTDKKGRIKIFPPAIMKPQRLWTGKQVVSTLLINIIPDNRAPLNLTGKAKIGGRAWVKGP
AKGCLNLDSMCESQVIIRDGELLCGVLDKAHFGSSAYGLVHCCYEIYGGEVSGKVLTCLG
RLFTAYLQLYRGFTMGIEDILVKPEADRKRKKIIERSRQSGIEAVRAALNLPEAASCEEV
QGKWQDAHLCKDQRDFNMVDMKFKEEVNSYNNEVNKVCMPLGLHRSFPENNLQLMVQSGA
KGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIRPS
EFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGED
GLDIPKTQFLQPEQFPFIAENYEVIQKTNHLDEALARMECHQANQHFKAIKKWRARHQNS
VQRKGGFLLFSQKKLASLKAELPGGEIKNGRDPATLQLLKMWYELDEKKRRKYLKKTNKC
PDPSLGVWRPDTYFASVSETFENGVEGYINKWQSESSWSYMHPALSSDRLKDLLYLKWQR
SLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTP
MMSVPVLNTKKALKKMKHLKKQLTRVCLAEVLQRVDIEESLHVKNKLNKHRLYKIKFQFL
PHEYYREEKCVKPRQILHFIETRFFKVLLEAIKKKTTKMASFNEVSTRKTTRKDLDDEQD
KTWNNLEAVAEEEENIVDAEVDEGDGDATEKKRRKNQEEEVDYESEEENEEENVNENPED
EEAESGKEEETDGAEEDQSRAEGEDSQHLSFVSQTKKGKDRLLQSAEVRVNAVVESHPSI
QDYTFDTENELWCEVSLALPLTKVYFDLSSLLASLARSTVIHEVKGIMRCLLNESTSKEG
EKEFVLQTEGINLTELFKYSDILDLNRLYCNDIHAMAKNYGIESALRVIIKEIKDVFAVY
GIVVDPRHLSLVADYMCFEGIYKPLNRIGIQSNSSPLQQMTFETSYKFLKEATMMGAHDE
LRSPSACLVVGKVVKGGTGLFDLKQPLT
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgcccaaagtggtgccgtggcggcggctggttggggtatccttcgggatgtac
acggccgacgagatcaggaaactgagtgtgaagcccataacaaaccctcagtacctggat
aatgtggggaatccggctgtaagtggactctacgacttggctttgggacctccggactcc
aaagaagtgtgtgcgacttgcatgcagaacttcagcaactgccccggacactttggccat
atagaactgcctctgactgtctacaaccccctgttctttgataaattataccttctcatc
cgaggatcttgtttgaattgccacatgttgacatgtcctcgagccgtggttcacttactg
ctaagtcagctgaaggtgctggagaaagggttgcttcatgctgtccatgaccttgaaatc
attctgaacaggtttatagagcaatgtgcagatgcaacaggctcagaaattgaggaagag
ttgaatcgccacgttcaggaaatgttacaaagctctcaaataagagatcggtgttcaaat
gtcaaaaatgtgtgtgagtgtagaaataaactgatatcacagttctggaaatcgcatatg
ggttcaaagaaatgcccaaactgcaaatccaggagatcactggtgcggaaggagcacaac
agcaagctgacagtgacctatccttctacaatgtgccataagtcaggagaggaaggcatt
ctggatgaaacagcaggtattgatgaaagccagttagggaagagaggctacctgacgcca
atgactgccaaagattacatcctggctctgtggaagaatgaaggtttctttctgcgttat
ctcttccctgggatggatccccatgagagttcaggattcagtccagacttgtttttttta
gatcttcttgtggttccaccttcaaggtatcgtcctgtaaatcgcgttggagatcgcctg
ttcacaaatggacagactgtgaacttgcaggctgtgataaaagatgcccagctgatacgg
aagctcttggttttcatggccaaagaacagtgtcagccaataaaaattacagaagagatt
caaacagcgacaggaggggatagtgaatccctggaccattctgtgctgacaacgattcca
ggacagagcattgcagataagctgtacaatacttggatacgtctccagagccatgtcaac
attgtgtttgatagtgacatggacaagctgataacagaaaaataccctggtattcgtcag
ctgttggagaagaaggaagggctgttccgcaagcacatgatggggaagcgtgtggatttt
gctgctcgatctgtcatttgccctgacatgtacattgggaccaacgagattggcatcccc
atggtatttgccaccaaactgacttatcctcagccagtcactccctggaatgtcaaagag
ctgaggcaggctgtcatcaatggccccaaggtgcaccctggggcctccatggtcattaac
gaggacgggtctcgcacggtgctgagcgccaccagcctgacccagcgcgaggccattgcc
aagcaactcctcaccccctcctcaggggcaccccagacagggctgaagattgtgtgtcgg
cacattaagaacggggatgtgctgttgctgaaccgccagcccacgcttcacagaccttcc
atccaagctcacagggcccgaatcctgcctggggagaaggtgctgaggcttcactacgcc
aactgcaaggcttacaacgctgacttcgatggggatgaaatgaacgcccatttcccgcag
agcgagctgggcagagcagaagcctacaccttagccttcactgatgagcagtacctggtg
ccaaaggatgggaagccacttcctggcctgatacaggatcacatgatttctggagtcagc
atgacaatccggggctgctttttcaccagagagcagtacatggagctcgtgtaccgaggg
ctgacagacaaaaaaggaagaattaaaatatttcctcctgccattatgaagccacagcga
ttatggacaggaaagcaggttgtttccactttgttaataaacatcattccagacaatcgt
gctccactgaatttgactgggaaagcaaaaattggtgggagagcctgggtaaagggacct
gcaaaaggatgtctgaatcttgattcaatgtgtgaatctcaggttattatcagagatggg
gaattactgtgtggagtcttggacaaagctcactttggcagctctgcctatgggcttgtc
cactgctgttatgagatctatgggggtgaagtcagtgggaaagtgctgacatgtctgggg
cgcctcttcactgcttacctgcagctgtacaggggatttaccatggggattgaagatatt
ttggttaaacctgaagcagaccgcaaaagaaaaaaaatcattgaaaggtcaagacagagt
ggtattgaagctgtcagagctgctcttaatttgccagaagcagcatcgtgtgaggaggtc
caagggaagtggcaggatgcccatctctgcaaagaccagagggatttcaacatggttgat
atgaaattcaaggaggaagtaaatagttacaacaatgaagtcaacaaggtttgcatgccc
cttggtctccacaggagctttccagagaacaatttgcagttgatggtacagtcaggagcc
aaaggatccactgtgaacacaatgcagatttcttgtttgctgggccagattgagctggaa
ggccgaagacccccactgatggcatctggcaaatccctgccatgtttccagccttatgac
ttttcccctagctcaggaggatttgtgactggcagatttctcactgggatcagaccttct
gaattcttctttcactgcatggctggcagggaaggtcttgtggatacagctgtcaaaacc
agccggtctgggtacctgcaaaggtgtatcataaaacatttggaaggactggtagttcag
tatgacctgactgtgcgagacagtgatggcagtgtggtgcagtttctgtatggtgaagat
gggcttgacatccctaaaactcagttcttacaacctgagcagtttcctttcattgcagaa
aactacgaggtaatccagaagacaaaccatctggatgaagctttagcaaggatggagtgt
caccaagctaaccagcacttcaaagccatcaaaaagtggcgagccagacaccaaaactct
gtgcaaagaaaaggaggctttctgttgttttcccaaaagaaattggcaagtttgaaagca
gagcttccaggaggtgaaataaagaatggaagagatcctgctacattacagttgttgaag
atgtggtatgagcttgatgaaaagaaacgaaggaagtatctgaagaagacaaataagtgt
cctgacccaagccttggggtttggcgtccagatacttattttgcatctgtttcagaaaca
tttgaaaatggagtcgaaggctatatcaataaatggcaatctgagagcagctggagttac
atgcacccagcactttcttctgatagattaaaggatctgttgtatttaaagtggcagcgt
tctctttgtgacccaggagaagctgtggggcttcttgctgctcagagtattggggaacct
tcaacacagatgactctgaacacctttcactttgctggcagaggtgaaatgaatgtcaca
ttgggtattccaaggttgcgggaaatactgatggtggccagctcaaacattaaaacacca
atgatgagtgttcctgtgctcaacaccaaaaaagctctcaagaagatgaaacaccttaag
aaacagctcacaagagtgtgcttagctgaggtcttgcagagagtggacatcgaggaatcc
ctgcatgtgaaaaacaagctgaacaagcatcgcctctacaaaatcaaattccagttcttg
ccccatgaatattaccgagaggagaagtgtgtgaagcccaggcagatcttgcacttcatt
gaaacaaggttctttaaagttcttctggaagcaattaaaaagaagactacaaagatggca
tcctttaatgaagtcagcactcggaagacaactcggaaggatttagatgatgaacaagac
aagacatggaataatctggaagctgtagcagaggaagaagagaacattgttgatgcagaa
gttgatgaaggagatggtgatgctacagaaaaaaagcggaggaagaaccaggaggaagag
gttgattatgagagcgaagaggagaacgaggaagaaaacgttaatgagaatccagaagat
gaagaggctgaatctggaaaagaagaagagactgatggtgctgaagaggatcagagcaga
gcagagggtgaagattctcagcatctttcctttgtgtctcagactaaaaaagggaaagat
cgattgcttcagtcagcagaggtgcgagtgaacgctgttgtggagagccacccatccata
caggattacacgtttgacactgaaaatgagctttggtgtgaggtttctttggcattgcca
ctgaccaaggtgtacttcgacctctcgtccctgctggcgtccctggcgcgcagcacggtg
atccacgaggtgaagggcatcatgcgctgcctgctgaatgaaagtaccagcaaggaggga
gagaaagaattcgttctccagacagaagggataaacctcacagagctcttcaaatactct
gatattttggacctgaatagactttattgcaatgatatccatgccatggctaaaaattat
ggaattgaatcagccctgagggtgattataaaggaaataaaagatgtatttgctgtatat
ggaattgtggtagaccctcgacacctttcacttgtggcagattacatgtgttttgaagga
atttataaaccactgaatcgcattggaattcagtccaactcctcccctctgcaacagatg
acatttgaaaccagctacaaattcttgaaggaagcaacgatgatgggtgcccacgatgag
ctgcgatccccttcggcctgcctggtggttggaaaagttgtcaaaggagggactggtttg
tttgacctcaagcagcccctgacatag
DBGET
integrated database retrieval system
