Pseudopodoces humilis (Tibetan ground-tit): 102113547
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Entry
102113547 CDS
T02921
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102113547 (TRIM71)
04121 Ubiquitin system [BR:
phi04121
]
102113547 (TRIM71)
Enzymes [BR:
phi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102113547 (TRIM71)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102113547 (TRIM71)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102113547 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-C3HC4
zf-RING_UBOX
DUF4094
Motif
Other DBs
NCBI-GeneID:
102113547
NCBI-ProteinID:
XP_005519037
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MASFPESDFQICPLCKEMCGSPAPLSSNSSTSSSSSQTSTSSGGGGGSSCGGPPRRLHVL
PCLHAFCRQCLEAQRHPGAGDALKLRCPICDQKVVISEPSGMDALPSSNFLLSNLLDVVV
VAAAADEQKNGRAAGTGPAAGSGGGGGGNNRHHGRPPPGPPRAAGSSPAAAASAAPSSTS
SSSXXXGGGGAWAALLLRRPHSRQGEPRCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRV
RLTKDHFIERFAAGPAATGPAAPLALSPPYPASPYNILSVFPDRASYCQHHDDEVLHFYC
DTCSVPICRECTMGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVA
EQVEMKAKVVQSEVKVVTTRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNK
LDNTISAVQQVLEEGRTMDILLARDRMLAQVQELKNVRGLLQPQEDDRIMFTPPDQALYM
AIKSMGFVSSGAFAPLTKATGEGLKRALQGKVASFTVMGYDHDGEPRLSGGDMISAVVMG
PDGNLFGADVSDQQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVVVKSGRSYIGIG
LPGLSFGSEGDSDGKLCRPWGVSVDKEGFIIVADRSNNRIQVFKPCGTFHHKFGTLGSRP
GQFDRPAGVACDNSRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVNA
EGKILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHR
LLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCK
FGTQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttcccgagtccgacttccagatctgcccgctgtgcaaggagatgtgcggc
tcgccggctcccctctcgtccaactcctccacctcctcgtcctcctcgcagacctccacc
tcctccgggggcggcggcggctcctcctgcgggggcccgccgcggcggctccatgtcctg
ccctgcctgcacgccttctgccgccagtgcctggaggcgcagcggcaccccggcgcgggg
gacgcgctcaagctgcgctgccccatctgcgaccagaaggtggtgatctcggagccctcg
ggcatggacgcgctgccctcctccaacttcctcctcagcaacctgctggacgtcgtcgtc
gtggcggccgccgccgacgagcagaagaacgggcgcgccgccgggaccggccccgccgcg
ggctcgggcgggggcggcggcggcaacaaccggcaccacggccgcccgccgccggggccg
ccccgcgccgccggctcctcgcccgccgccgccgcctcggccgcgccctcctcgacgtcg
tcgtcctcnnnnnnnnnnggcgggggcggggcctgggcggcgctcctgctgcggcggccc
cacagccggcagggcgagccccgctgcagctcctgcgacgagggcaacgccgccagctcc
cgctgcctcgactgccaggagcacctgtgcgacaactgcgtgcgggcgcaccagcgcgtc
cgcctcaccaaggaccacttcatcgagcgcttcgccgccggtcccgccgccaccggcccc
gccgcgccgctcgccctcagcccgccctatcccgcctcgccgtacaacatcctctccgtc
ttccccgaccgggccagctactgccagcaccacgacgacgaggtactgcatttctactgt
gatacctgttctgtccccatatgtcgggaatgtaccatgggacgacatgtgggtcacagc
tttatctacctccaagacgccctacaggactccaggactctcaccattcagctcctggca
gatgctcagcaaggacgacaggctattcaactgagtattgaacaggcccaggctgtggca
gagcaagtcgagatgaaagcgaaggtggtacagtctgaagtcaaagtagtgaccactaga
cataagaaggccttggaggagcgggagtgtgagctgctctggaaggtggaaaagattcgc
caagtcaaggccaagtcactgtacttgcaagttgaaaagttgcgtcagaacctaaacaag
ctggataacaccattagtgctgtccagcaggtcctggaggagggtcgtaccatggatatt
cttctggctcgggaccgcatgctggctcaggtgcaggagctgaagaacgtcagaggcctt
ctccagccacaggaagatgacaggatcatgttcaccccccctgaccaggcattgtatatg
gccattaaatcaatgggctttgtcagcagcggggctttcgcccccttaaccaaagccacg
ggggaaggtctcaagcgtgcgctgcagggcaaggtggcctcgttcaccgtgatgggctac
gaccacgacggggagcctcgcctttcagggggtgacatgatctctgcagtggtcatgggc
ccagatggaaaccttttcggggcggacgtcagcgatcagcagaacgggacctacctggtc
agctaccgtccgcagctggagggagagcacctggtgtccgtgatgatgtgcaaccaacac
atcgagaacagccccttcaaagtggtggtgaagtccgggcgcagctacatcggcatcggg
ctgccggggctgtccttcggcagcgagggagacagcgacggcaagctctgccgcccctgg
ggggtcagcgtcgacaaagaaggcttcatcatcgtcgccgaccgcagtaacaaccgcatc
caagtgttcaagccgtgcgggaccttccatcacaagtttggcacgctgggctcccggccg
ggccagttcgatcgccctgccggcgtggcctgtgacaattcgcgtaggatcgttgtggcc
gacaaggacaatcatcgcatccagatcttcacgttcgaggggcagttcattctcaagttt
ggggagaaaggaacgaagaacgggcaattcaattacccatgggatgtggctgtcaacgca
gagggcaagatcctggtctctgacacgaggaaccatcgcgttcagctgtttgggcccgac
ggcgtgttccttaacaagtacggcttcgaaggggcactctggaagcactttgattccccc
agaggtgtgacgttcaatcacgagggccacttggtagtgacggacttcaacaaccatcgg
ctcctggtcatccatccagattgccagtcggcacgcttcctgggctccgagggcaccggc
aacgggcagttcctgcgcccgcagggagtggcggtggatcaggaagggcgcatcatcgtg
gccgactccaggaaccatcgggtgcagatattcgagtccaatggtagctttttatgcaag
tttggcactcagggaagcggctttggtcagatggaccgtccttcaggtatagctgtcacc
cctgatggcatgattgttgtggtcgacttcggaaacaatcgaattctcgtcttctaa
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