Pseudopodoces humilis (Tibetan ground-tit): 102113615
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Entry
102113615 CDS
T02921
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phi03036
]
102113615 (SMARCAL1)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102113615 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
DUF7480
ERCC3_RAD25_C
OmpA
Flavi_DEAD
Hac8_like_N
Motif
Other DBs
NCBI-GeneID:
102113615
NCBI-ProteinID:
XP_005519743
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MSAGLTEEQKKRIEENRRLALARRAERLAAQRAEHVGIAAPPEKQQSLGNPGNSKEESNH
VGFTSQHRQNPNTPVEQKSCLQKGYNHYTANQQMAGSHREQQKSCSEDVEQASGLKQLPA
MIPNSLSYSHKHDLDAGSQEHRQHTLINHGTFQQPKCYPAFKKPTGPPHRRFIDNGHPDS
SKDLQTQNKPAIKYVSPPSSTALSDSEMLINTPTERTGGGFASQGSVRMQKLTSSAGVGS
TFEAASHKKASNVTKGKCVKYGEDRFQVEIGYNAELIAVFKRVPSKTYDPAMKKWNFSME
DYSSLLEAANKLSSVILAPLDRENAVGSASGSHFVGSGVDMKSLLKMCKNWKKPSALVKG
KCVLTSRLRFEVDIGYSAEVIGVFKQMDSRNYDMNTRKWNFLLEDYPKLMKVLLSLVSVE
VEPLPEAVIKTFAAQLQRSPSQTDIPDADLSVVDSKIVTSLMPFQREGVNFAISRDGRLL
LADDMGLGKTIQAICIAAYYQQEWPLLVVTPSSVRFTWAEAFHRWLPSLSPESTNVIVSG
KDNLTGSLINIISFDLLSRMDKQLKSTFQVVIVDESHFLKNTKTARCQAAMPLLKAAKRV
ILLSGTPAMSRPAELYTQIAAVQPTFFPQFHSFGLRYCDAKKMPWGWDYSGSSNLTELKI
LLEESIMIRRLKSDVLSQLPAKQRKMVVVAPEGISAKTKAALAAEAKKMAKGYESKQQEK
EALLVFFSRTAEAKIRSVVEYILELLESGNNKFLVFAHHKIMLDAVVAELKKKHVEYIRI
DGCTSSAERQSLCQKFQFSEKQAVAVLSLTAANMGLTLSAADLVVFAELFWNPGILIQAE
DRAHRIGQTSSVNVHYLVAKGTADDYLWPMIQEKIKVLGEAGLSETNFSETAESTNYFPR
PDPKQKTIYDLFQKTFSESRDDADDILFLEAADAGCEFDSGSALQDRETETCSVSPKKKR
RIEEV
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaggccttacagaggagcaaaagaaaaggattgaagagaaccgccggctagct
ttggctaggagagcggagaggctggcagcacagagagctgagcacgtgggcatcgctgca
cctccagagaaacagcagagtctgggcaatccgggaaactcaaaggaagaaagcaatcat
gtcgggttcaccagccagcaccgacagaatccaaacacgcctgtggagcagaagagctgt
ctccagaaaggctataaccattacacagcaaaccaacagatggctggctcacacagagag
cagcaaaagagttgttcagaggacgtggaacaagcaagtggccttaagcagctccctgca
atgatcccgaattcactgagttattcccataaacatgacttggatgctggtagtcaggaa
catagacaacacactttaattaatcatggaacattccagcagcccaaatgctacccagct
ttcaaaaagcccacaggaccacctcatcgaagattcattgataacgggcaccctgacagc
agtaaagatttacaaactcagaacaaacctgccattaaatatgtttcaccaccaagcagc
actgccctgagtgattcagaaatgctgataaacacaccgacagaaagaacagggggaggt
tttgcctctcagggcagtgttaggatgcagaagctgaccagctctgctggtgtgggctct
acctttgaagctgcctctcacaagaaagcaagtaatgttacaaaaggaaaatgtgtgaaa
tatggggaagaccgattccaggttgaaatagggtataatgctgaacttattgctgtgttt
aagagggtaccaagcaaaacctatgatcctgctatgaaaaaatggaatttcagcatggaa
gattacagcagtctcttggaagcagcaaataaactttcatcagtaattctggcaccgctg
gacagagaaaatgcggttgggtcagcatcaggctctcattttgttggcagtggggtagat
atgaaatccctcttgaagatgtgtaagaactggaagaaaccctcagcccttgtcaaaggg
aagtgtgtgcttacctctcgcttgcgatttgaggtcgatattgggtattctgcagaagtg
attggagtgttcaaacagatggattccagaaattatgatatgaataccagaaagtggaat
ttcctgctggaggattaccccaaactaatgaaagtgttactgagcctcgtatctgtagaa
gtggagccactgcctgaagcagtaattaagacctttgctgctcaactccagagatctcca
tcacagacagacattcctgatgctgacctttcagtagtggactccaaaattgtgacaagc
ctcatgccctttcagcgggaaggtgtgaattttgcaatttccagagatggacgtttgctc
ctcgcagatgacatgggcctgggcaagaccatccaggccatctgcattgctgcctattac
cagcaggaatggcccttgctggtggtcactccttcttccgtgaggtttacatgggcagag
gcatttcacagatggcttccatccttgagtccagaaagcaccaatgtcatagtgagtggg
aaagacaacctaacaggaagcttgatcaacatcatcagttttgatctcctcagcaggatg
gacaagcaacttaagagcacattccaagtagttattgttgatgaatctcatttcctgaag
aacacaaaaactgcacgctgccaagctgccatgcctctacttaaggctgccaagagagtg
atcctgctttcgggaacgccggccatgtcgcggcccgcggagctctacacgcagatcgcc
gctgtgcagccaaccttcttcccacagttccactcctttgggctgcgctactgtgatgcc
aagaagatgccatggggttgggactactctggatcgtccaacttaactgaactgaaaatt
ttgctggaagagtccatcatgatccgacgtctgaaatcagatgtgctttcccagcttcca
gcaaagcaacgcaaaatggttgtggtggctcctgaaggcattagtgcaaagaccaaagct
gcgttggcagctgaagcaaagaagatggccaaaggatatgaaagtaaacaacaggagaag
gaagctcttcttgtcttcttcagcagaacggcagaagctaaaatccgctcagtcgtagaa
tacatcctggagttactggaaagtgggaataataaattcctggtgtttgctcatcacaag
ataatgctggatgcagtggttgcagagctgaagaagaaacatgttgagtacattcgcatt
gacggctgcacatcttcagctgagcggcagtctctgtgccagaagttccagttctcagag
aagcaggctgtggctgtcctttcactcactgctgcaaacatgggcctgacactgtctgct
gcagatctggtggtgtttgcagagctcttctggaacccagggattttgatccaagcagaa
gatcgagcacaccgaattggacaaaccagctccgttaatgttcactacctggtggctaaa
ggcacagcagatgactacttatggccaatgattcaggagaagatcaaagtgctgggtgaa
gctggtctttcagaaaccaatttctccgaaacagctgagtcaactaactactttcccagg
ccagatccaaaacagaagactatctatgaccttttccagaagaccttctctgagagcaga
gatgatgctgatgatattttgtttttggaggcagctgatgctggctgtgagtttgactct
ggcagtgccttgcaagacagagaaacagagacatgttcagtgagtcccaaaaaaaagcgg
cgtattgaggaagtgtaa
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