Pseudopodoces humilis (Tibetan ground-tit): 102113971
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Entry
102113971 CDS
T02921
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102113971 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phi01009
]
102113971 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phi04515
]
102113971 (PCDH9)
Protein phosphatases and associated proteins [BR:
phi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102113971 (PCDH9)
Cell adhesion molecules [BR:
phi04515
]
Cadherins
Protocadherins
102113971 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
RCR
V_ATPase_I
EphA2_TM
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
102113971
NCBI-ProteinID:
XP_014110052
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSNTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGHPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPSTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQVNEYSEED
EVPYMSQKCPGKTSYNCRENEESNTESQRRVTFHLPDGSQESCSDSGLGDHEPVGGGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPSLGPYQQPKSPLSTFAPQKEWVKKDKLVNGHTLTRTWKEDSNRNQFSDRKQYGS
SEGHFNTGNHMTDIPLANLKSYKQAPGSVESPKEHQL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctttgattgcctgtttaaggctggattct
gctatagctcaagaacttatttacactattagagaggagctgcctgaaaacgtgcccata
gggaacataccgaaggacctgaacatttctcatatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtgtctaaagcaggggatgcacctctggtcaaagtgtccagt
aacacaggggaaatctttacaacatctaacagaatagacagagaaaaactatgtgctgga
gcttcctatgcagaagaaaacgagtgtttctttgaacttgaagtggtgattcttcccaat
gacttttttaggctgatcaaaataaaaatcattgtaaaggacactaatgacaatgcgcct
atgtttccatcccctgtcatcaatatctccatcccagaaaatactctgatcaacagtcgc
tttccaatcccatcagctacagatcctgacacaggtttcaatggtgtgcagcactatgag
ttgttaaacgggcagagtgtctttggactggatattgtagaaactccggaaggggagaaa
tggcctcagctgattgtgcagcagaacctggacagagagcaaaaggacacctacgtgatg
aaaatcaaagtggaggatggaggtaccccccagaaatccagcacagctatcctgcaagtc
acagtaagtgatgtcaatgataacaggccagtctttaaagagagtcaagtagaggtccat
ataccagagaatgcccctgtaggtacctctgtaattcagcttcatgctacagatgctgat
ataggaagcaatgcagaaatcagatatatttttggtgcccaagtcgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagttcagaggtccttagatcga
gaagagactgctattcacaaagtgacagtgctggctagtgatggtagctctacaccagcc
cgggcaactgtcaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacataataagtcccatcaatggcacagtgtacttatctgagaaagatcccatcaat
acaaagattgccctaattacggtttcagataaggacactgatgtgaatggcaaagtgatc
tgtttcattgagagagaggtccccttccacttgaaagcagtttacgacaaccagtatttg
ttagagacctcttccttgttggactatgaggggaccaaagaattcagctttaaaattgtg
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaagctggag
gatgaaaatgacaaccctccaattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccggcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggtcctaatgcctcctttttcgatctggatcgaaag
acaggagttttgacagcctccagagtttttgacagagaagagcaggaacgtttcattttc
actgttacagcccgagacaatggcacccctcctttgcagagtcaagcagctgtaattgtt
actgtgctggacgaaaatgacaacagtcccaaatttactcataatcatttccagtttttt
gtatcagagaacttaccaaagtatagcacggtgggggtgatcacagtgacagatgcagat
gctggggaaaataaagcagtgaccctatccatcttgaatgacaatgaaaacttcgtgctg
gatccgtactctggagttataaagtccaacgtttcttttgatcgagaacagcagagctct
tacacttttgatgttaaggcagtggatggagggcatcctcctcgctcttctacagcgaaa
gtaacaataaatgtgatggatgttaatgacaacagtcctgttgtcatctacccaccttct
aatacttcttttaagctagtgccactctcagcaattccaggatcggtggtagccgaagtc
tttgctgtggatatagacactggcatgaacgctgaactgaagtacacgattgtaagtggc
aataacaagggtttgtttcggattgatccagtgacaggtaatatcactctggaagaaaaa
ccaactcctaatgatgtggggctgcatcgcttagttgtcaacataagtgatctgggttat
cccaaatctctgcatactcttgtgcttgtttttttatatgtaaatgatactgctggaaat
gcctcttatatttatgacttgatacgcaggactatggaaacacctttggatcggaacata
ggggacagtagccaaccttaccaaaatgaggactatctcactatcatgatcgctattgtg
gcgggtgccatggttgtcatagtggtgatatttgtcacagttcttgttcgctgtcgacat
gcgtccagattcaaagctgcccagaggagcaagcaaggtgctgagtggatgtctcccaat
caggaaaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccaaagagctcc
cttttgaactttgtgaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aacgggacaataagccttccagcagagctggaggagcaaagtataggaagatttgattgg
ggcacagcaccaccatcaacctttaagcctaacagtcctgatcttgccaagcattacaaa
tctgcctctccgcagtctgcttttcatctcaaacctgacactccagtttcagtgaaaaag
caccatgtgattcaggaactccctttggacaacacctttgttggtggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacaggtaaacgagtattcagaagaagat
gaagtcccatacatgtctcagaagtgtcctgggaaaacatcttataattgcagggaaaat
gaagaaagcaacactgaatcccagcgccgtgttacatttcacctccccgatggctcccag
gaaagctgcagtgacagtggtctgggagaccacgagccagtgggtggtggaaccctgatc
tcacaccctcttcctctggttcagccgcaggacgaattctacgaccaggcttcaccggac
aagaggactgaagctgacggcaattctgaccccaactcggatgggcctcttggtccacga
ggattagctgaagctacagagatgtgtactcaagaatgcctggttttgggtcactcagac
aactgttggatgcctcctagcttgggcccataccagcagccaaagtctcctctctccacc
tttgcacctcagaaagaatgggttaagaaggacaaactggttaacgggcacacattgacc
aggacctggaaagaagatagcaacagaaaccagttcagtgatcgaaagcagtatggttcc
agtgagggccatttcaacactggcaaccacatgactgacattcctctggccaacttgaag
tcttataaacaggccccgggatctgtggagagtccaaaggagcaccagctataa
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integrated database retrieval system
