Pseudopodoces humilis (Tibetan ground-tit): 102114033
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Entry
102114033 CDS
T02921
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein
KO
K06839
slit 2
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
phi00536
]
102114033 (SLIT2)
Glycosaminoglycan binding proteins [BR:
phi00536
]
Heparan sulfate / Heparin
Axon guidance molecules
102114033 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRRCT
LRR_1
hEGF
EGF_TEN
LRR_14
EGF_DL_JAG
EGF_3
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
102114033
NCBI-ProteinID:
XP_005517867
LinkDB
All DBs
Position
Unknown
AA seq
1520 aa
AA seq
DB search
MMCGRGKLTLSLGLLLAMAGAVAPQPCPAQCSCSGSTVDCHGLALRGVPRNIPRNTERLD
LNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSEL
LFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLT
LNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSH
LRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPTACTCSNNIVDCRGKGLTEIPTNLPET
ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKIT
ELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA
IQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSGT
EDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELRLNNNEFSVLE
ATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLESVQHKMFKGLESLK
TLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCN
CHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLARCPA
ECTCLDTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRI
STLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLS
ALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG
SVDINILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDIPIHACISNPCHHG
GTCHLKEGEKDGFWCTCADGFEGENCEVNVDDCEDNDCENNSTCVDGINNYTCLCPPEYT
GELCEEKLDFCAQNLNPCQHDSKCILTPKGYKCDCTPGYVGEHCDIDFDDCQDNKCKNGA
QCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNYECQNGAQCIIKESEPICQCLS
GYQGEKCEKLISINFVNKESYLQIPSAKIRPQTNITLQIATDEDSGILLYKGDKDHIAVE
LYRGRVRVSYDTGSYPASAIYSVETINDGNFHIVELLAMDQILSLSIDGGSPKIITNLSK
QSTLNFDSPLYVGGMPVKNNVAALRQSPGQNGTSFHGCIRNLYINSELQDFRNVPLQVGI
LPGCEPCHKKVCVHGTCHATSQSGFSCECEGGWTGPLCDQQTNDPCLGNKCVHGTCLPIN
AFSYSCKCLQGHGGVLCDEEEMLFNPCQSIRCKHGKCRLSGLGKPYCECGSGYTGDSCEK
EISCRGERVRDYYQKQQGYAACQTTKKVSRLECKGVCSAGQCCGPLRSKRRKYSFECTDG
SSFVDEVEKVVKCGCTNCPS
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcggccgggggaagctcaccctgtccctggggctgctgctggcgatggcgggc
gcggtggcgccgcagccgtgccccgcgcagtgctcctgctcggggagcaccgtggactgt
cacgggctggcgctgcgcggcgtcccgaggaacatcccccgcaacaccgagaggctggat
cttaatggaaataacatcacaagaatcacgaagactgactttgctggtctaaggcacctt
cgagtccttcagctcatggagaacaagatcagtactattgagagaggagcattccaggat
ttaaaagaactggagaggctgcgcctaaacagaaataacctccagttgctttctgagctg
ctctttctggggacgccgaagttatacaggcttgatcttagtgaaaatcagattcaagca
ataccaaggaaggcattccgaggagcagtagacataaaaaatctgcaactggattacaac
cagatcagctgtattgaagatggggcatttagggctctgcgtgacctggaagtgctcact
ctcaacaataacaacatcactcgactatccgtggcaagtttcaaccatatgcccaaactc
agaacattccgcctccactccaacaacctgtactgcgattgccacctggcctggctgtcg
gactggctgcggcagcggccgcgcgtggggctctacacgcagtgcatggggccgtcacac
ctgcgcgggcacaacgtggccgaggtgcagaagcgggagtttgtctgcagcggccaccag
tcctttatggctccatcctgcagtgtcttgcactgccctactgcatgcacctgtagtaac
aacatcgtggactgtcgtgggaaaggccttactgagatcccaaccaaccttccagaaacc
attactgaaatacggttagaacaaaattcaatcaaggtcatacctcctggagctttctcc
ccctataaaaagcttcgaagaattgacctgagcaataaccagatctctgaagcagctcca
gatgctttccagggcttacgttctctcaattcacttgtcctctatggcaataaaatcaca
gaacttccaaagggactatttgaaggactcttttctctgcaactgctattattgaatgcc
aacaagattaattgtctgcgagtagatgcatttcaagatctgcacaacttgaatcttctt
tctttgtacgacaacaagcttcagaccattgcaaaaggcaccttctcacccctacgtgca
attcagaccttgcatttggctcagaacccatttatctgtgactgccatctgaagtggctg
gcggattatcttcacacaaaccccattgagaccagtggtgcccgttgcaccagcccccgc
cgtctggcaaacaaaaggatcggccagatcaaaagcaagaaattccgctgctcaggcact
gaagattacagatccaaattaagtggagactgctttgcagatttggcttgccctgagaaa
tgtcgctgtgaaggaaccacagtggactgctccaatcagaaactcaacaaaattcctgat
cacattccccagtacacagcagagttgcgactaaataacaacgaattttcagtcctggaa
gctactggaatctttaagaaacttcctcagctgcgtaaaataaacttgagcaataacaag
attacagatatagaagaaggagcatttgatggagcctctggtgtgaatgaactactgctc
acaagcaaccgcttggaaagtgttcaacacaaaatgttcaaaggactagaaagtctcaaa
acactgatgctgaggagcaacagggtgagctgtgtgggaaatgacagcttcacagggctg
agctctgtccgcctgctctcgctgtatgacaaccagatcaccaccgtggcacccggctcc
ttcgacacgctgcattcactctctactctaaacctcttggccaatcccttcaactgcaac
tgccatcttgcctggcttggagactggctaaggaagaaacgcattgtgacagggaaccct
cgctgccaaaaaccttacttcctcaaagagattcctatccaggatgtggccattcaggat
tttacatgtgatgatggaaatgatgacaatagctgctctcccctggcccgctgccctgca
gaatgtacttgtctggacacagtcgttcgctgcagcaacaaaggtctaaaagctttgcct
aaaggcatcccaaaagatgtgactgaactttatttggatggaaatcagtttacccttgtt
ccgaaagagctttccaactacaagcatttgacactcatagatttaagtaacaacagaatc
agcactctttctaatcagagcttcagcaacatgactcagctgctcaccttaattcttagt
tacaaccgcctaagatgtattcctgcacggacttttgatgggttgaaatcactaaggttg
ctgtctttacatggcaatgatatttctgttgttcctgaaggagcctttaatgatctttca
gcattatcacacctggctattggagcaaatcctctttattgtgattgtaatatgcagtgg
ctatctgactgggtaaaatcagaatacaaagaacctggtattgcacgttgtgctggtcct
ggagaaatggcagataaacttcttctcacaactccttctaagaaatttacttgccaaggg
tctgtggatattaatattcttgcaaaatgtaatccgtgtttatcaaatccatgtaaaaat
gatggaacctgcaataatgatccagttgacttctacagatgtacatgtccatatggtttc
aagggtcaagactgtgatattcccattcatgcttgcattagtaacccatgccaccatggt
ggaacttgtcatttgaaagaaggagaaaaagatggtttctggtgcacttgtgcagatgga
tttgaaggtgaaaactgtgaagtaaatgttgatgactgtgaagacaatgactgtgaaaac
aattctacttgtgtggatggcattaataactatacttgcctttgtccacctgaatataca
ggtgaactctgtgaggagaaattagatttctgtgcccaaaacctgaatccttgccagcat
gattcaaagtgtatcttaacacccaaaggatacaaatgtgattgcacacctgggtatgta
ggtgagcattgtgatattgactttgatgactgccaggacaacaaatgtaaaaatggagcg
cagtgcactgatgcagttaatggatatacgtgcatttgcccagaagggtacagtggcttg
ttttgtgagttttcaccaccaatggttctacctcgcaccagcccttgtgataattatgaa
tgtcaaaatggggcccagtgtatcataaaagaaagtgaaccaatctgtcagtgtttatca
ggctaccagggtgagaaatgtgaaaagctgattagtataaacttcgtcaacaaagaatcc
tatctgcaaatcccttcagctaagatacgcccccaaaccaatatcactctacagattgcc
acagatgaagacagtgggatcctgttgtacaaaggcgataaagatcatatagcagtggaa
ctgtaccggggtagagtgagggtcagctatgacacaggatcatatccagcctctgctatt
tacagtgtggaaacaattaatgatggcaatttccacattgtggagctgttagctatggat
cagattctatctttatctattgatggaggaagtcccaagataattaccaatttgtccaag
caatccactctgaattttgattctccgctgtatgtaggaggcatgcccgtgaaaaataat
gtagcagctttacgccagtcaccagggcagaacggcactagcttccatggttgcatccgt
aatctgtatatcaacagtgaactccaggacttcagaaatgtgccactgcaagtgggaatt
ctgccaggttgtgagccttgtcataagaaagtttgtgtgcatggcacatgccacgccacc
agccagtcaggcttctcctgtgagtgcgaaggaggatggaccggaccactctgtgatcaa
caaactaacgacccatgtcttggaaataaatgtgtgcatggtacctgcttgcccatcaat
gcattttcatacagttgtaaatgcctgcagggacatgggggagtcctctgtgatgaagag
gaaatgctgtttaacccctgccaatccatcaggtgtaaacatggcaaatgtaggctttca
ggacttgggaaaccatattgcgaatgcggcagcggatacacgggggacagttgtgaaaaa
gaaatctcttgtcgaggggaacgagtccgagattactaccaaaagcagcaagggtatgct
gcgtgccagacgaccaagaaggtatcgagactagaatgtaaaggcgtgtgctcagccggg
cagtgctgtgggccactacggagcaagaggcggaaatactccttcgaatgcactgacggg
tcctcatttgtggacgaggttgagaaagtggtgaagtgtggctgtacaaattgtccctcc
taa
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