Pseudopodoces humilis (Tibetan ground-tit): 102114336
Help
Entry
102114336 CDS
T02921
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1 isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phi03000
]
102114336 (SOX1)
Transcription factors [BR:
phi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102114336 (SOX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102114336
NCBI-ProteinID:
XP_005516653
LinkDB
All DBs
Position
2:24820704..24821875
Genome browser
AA seq
374 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGQTGAGGGGGGGGGGGGGNKANQDRVKRPMNAFMVWS
RGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRP
RRKTKTLLKKDKYSLAGGLLSAGSAGGGPAGVGVGMGVGVSPGGVGQRLESPGGTASGGY
AHMNGWANGAYPGSVAAAAAAAAMMQEAQPAYSQHPGSGGHPHHPHPHHPHHPHNPQPMH
RYDMGALQYSPISNSQGYMSASPSGYGALPYGSQPHQNSAAAAAAAAAAAAASSGALGAL
GSLVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAAAAQSRLHSLPQHYQS
ASTGVNGTVPLTHI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttgcactcccctggcggagcccaggcccccacg
aacctctcggggcagaccggagcgggaggcggcggaggcggcggcggcggcggcggcggg
gggaacaaagcgaaccaggaccgggtcaagagacccatgaacgccttcatggtgtggtcg
cggggccagcggcggaagatggcccaggagaaccccaaaatgcacaactcggagatcagc
aagcgcctgggggccgagtggaaagtcatgtcggaggccgagaagagaccgttcatcgac
gaggcgaagcggctgcgggcgctgcacatgaaggagcacccggattataaataccgacca
cggcggaagaccaagaccctgctcaagaaggacaagtactcgctggccggggggctgctg
agcgccggctcggccgggggaggcccggccggcgtcggcgtgggcatgggcgtcggcgtc
agcccgggcggcgtcgggcagcggctggagagccccggcggcacggccagcggcggctac
gcgcacatgaacggctgggccaacggcgcctacccgggctcggtggcggccgcggcggcg
gcggcggcgatgatgcaggaggcgcagcccgcctacagccagcacccgggcagcgggggg
cacccgcaccacccgcacccacatcacccgcaccacccgcacaacccgcagcccatgcac
cgctacgacatgggtgccctgcagtacagccccatctccaactcgcagggctacatgagc
gcctcgccctcgggctacggcgccctgccctacggctcccagccccatcagaactcggcg
gcggcagcggcggcagcggcagcggcggcggccgcctcatcgggtgcgctgggcgccctg
ggctcgctggtgaagtcggagcccagcgtgagcccgcccgtcacctcgcactcgcgggcc
ccgtgccccggggacctgcgggagatgatcagcatgtacttaccggccggggaaggtggg
gatccggcggccgctgccgcccagagccggctccactccctgccccagcactaccagagc
gccagcacgggggtgaacggcaccgttcccttgacgcatatctga
DBGET
integrated database retrieval system
