Pseudopodoces humilis (Tibetan ground-tit): 102114395
Help
Entry
102114395 CDS
T02921
Symbol
SKIV2L
Name
(RefSeq) helicase SKI2W
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102114395 (SKIV2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102114395 (SKIV2L)
Enzymes [BR:
phi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102114395 (SKIV2L)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102114395 (SKIV2L)
mRNA degradation factors
3'-5' decay
Ski complex
102114395 (SKIV2L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
Helicase_C
MTR4-like_stalk
AstA_C
Stk19
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
102114395
NCBI-ProteinID:
XP_014117669
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MELERIGETGGAGGGFGRGRWPFRPDPFQQRAALCLERGHSLLVAAHTSAGKTAVAEYAI
GLARRHMTRSIYTSPIKALSNQKFRDFRATFGDVGLLTGDVQLRPEAACLVMTTEILSRT
KRRCVRVLSTPRRPVPLEHFLFTGNSARNRHQLFQLLGPGGAFSTQGYYAAVEAKKEQSS
KHAQSFGARQPTMGAPNPGQERGVWLSLLQTLRERELLPAVTFTFSRGRCEEQAAALGSL
ELLSGAERAQVRQFLTRCLARLRGSDRRLPQVLQLSELLQRGIGVHHGGVLPLLKEVVEM
LFSQGLVKVLFATETFAMGVNMPARTVVFDSIRKHDGNGFRDLLPGEYTQMSGRAGRRGL
DATGTVIILCKGAVPELSDLHRMMLGRPSPLQSRFRLTYPMILLLLRAPALRPHDLMRRS
FAEFPLRRDATAQTRRVAALREALGALGDPEVTDGGDSGDMADLAQYHRAVQGLRRARAV
LQVTPGGSGRTWTTLVLSEKPPKSGEEPPKSGEKPPQDVPYPEDLLLTRLFLPEGPPGHC
LEQLRPEDIVGVTAKTLRVNPEILLQELRPPKGPRPRFGSLPTDLGLSPQIWYAQFAARQ
ELLQQLEELQFQLSDQSLLLLPEYHQRLEVLTELGYISGGAVALGGRVAALLSAEQLVLT
ELLLGNVLAPLRPEESVALLSCLVTPGRSGDPRPEGLPPALEEALQRLQAVAARVGRLEQ
QHGLGPGPDDFVAQFGFSLVQVVYEWARGMPFAEIARLAPVQEGTNRLRDEGRVRFLHLG
LGPDALGVVSLELYREKALAAVAGTPREGLVRRFLDVAVAGTPELSLEQQRMRELGFGDR
DVTALVAAGLLTVRDAGSWWLAVPGAGRFVRALLRGRASTAIAALRAGSAPRHVTRGASG
AS
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggagctggagcggatcggtgagaccggaggggccggggggggcttcgggaggggccgg
tggccgttcaggccggacccgttccagcagcgcgcggcgctgtgcctggagcgcggccac
tcgctgctggtggccgctcacacctcggccggcaaaaccgcggtggccgagtacgccatc
gggctggcccggcgccacatgacacggtccatctacacctctcccatcaaggctttgtcc
aaccagaagtttcgggatttccgcgccaccttcggggacgtggggctgctgacgggggac
gtgcagctgcgccccgaggccgcctgcctggtgatgaccaccgagatcctcagtcgcacc
aagcgccgctgtgtccgggtgttgagcacgccgcggcgcccggtgccgctggagcatttc
ctgttcaccgggaacagcgcccggaaccggcaccagctgttccagctgctgggcccgggg
ggggccttcagcacccaggggtactacgcggcggtggaggccaagaaggagcagagcagc
aaacacgcgcagagctttggggcgcggcagcccaccatgggcgcccccaaccccgggcag
gagcgcggcgtgtggctgtcgctgctgcagacgctccgcgagcgggagctgctcccggcc
gtcaccttcaccttctcgcggggccgctgcgaggagcaggcggccgctctgggctccctg
gagctgctgagcggcgccgagcgcgcccaagtgcggcagttcctgacgcgctgcctcgcc
cggctgcgcggctccgaccgccgcctgccccaggtgctgcagctgtcggagctgctgcag
cgcgggatcggcgtccaccacggcggggtcctgccgctgctcaaggaggtggtggagatg
ctcttcagccaggggctggtgaaggtgctgtttgccaccgagaccttcgccatgggggtg
aacatgccggcgaggaccgtcgtcttcgactccatccgcaaacacgacgggaacggcttc
cgtgacctcctgcccggcgagtacacgcagatgtcggggcgcgccggccgccgcgggctg
gacgccaccggcaccgtcatcattctctgcaagggagccgtgcccgagctgtcggatctg
caccgcatgatgctgggccggccgtcgccgctgcagtcgcggttccgcctgacgtacccc
atgatcctgctgctgctccgcgccccggccctgcgcccgcacgacctcatgcgccgcagc
ttcgccgagttcccgctgcgccgcgacgccacggcccagacccgtcgcgtggccgccctg
cgggaggctctgggggctctgggggaccccgaggtgacagatgggggtgacagcggggac
atggcggacctggcgcagtatcaccgcgccgtgcaggggctgcgccgcgcccgcgccgtg
ctgcaggtgacccccgggggctccggccgcacttggaccacgctggtgctgagcgagaag
ccccccaaaagtggggaggagccccccaaaagtggggagaagcccccccaggacgtgccg
taccccgaggatctgctgctcacccgcctcttcctgcccgagggcccccccgggcactgc
ctggagcagctgcgccccgaggacatcgtgggggtcacggccaagaccctgcgggtgaac
cccgaaattctgctgcaggagctgcggccccccaagggaccccggccccgatttgggtct
ctccccacagatttgggtctctccccacagatttggtacgcccagtttgcggccaggcag
gagctgctgcagcagctggaggagctccagttccagctgtcggatcagtccctgctgctg
ctgccggagtatcaccagcggctggaggtgctcacagagctggggtacatctcggggggc
gcggtggcgctggggggccgcgtggccgcgctgctgagcgcggagcagctggtgctgacg
gagctgctcctggggaacgtcctggccccgctgcggcccgaggagagcgtggccctgctc
tcctgcctcgtcacccccggccgcagcggggacccccggcccgaggggctgcccccggcc
ctggaggaggccctgcagcgcctgcaggccgtcgccgcccgcgtcggccgcctggagcag
cagcacggcctcgggcccggccccgacgacttcgtggcccagttcggcttcagcctggtc
caggtggtctacgagtgggccaggggcatgccgttcgcggagatcgcgcggctggcgccg
gtgcaggaggggacgaaccggctccgggacgagggccgtgtccggttcctgcacctgggg
ctgggccctgacgcgctgggcgtggtcagcctggagctctaccgggagaaggcgctggcg
gccgtggccgggaccccccgggaggggctcgtccggcgtttcctggacgtggccgtggcc
gggacccccgagctgagcctggagcagcagcggatgagagagctggggttcggggaccgg
gatgtgacggctctggtggccgcggggctcctgaccgtgcgcgacgccgggagctggtgg
ctggcggtgccgggagccgggcgcttcgtgcgggctctgctgcgcggccgcgcctccacc
gccatcgccgctttaagggcaggttccgccccccggcacgtgacgcgcggcgcttccggt
gcctcttaa
DBGET
integrated database retrieval system
