KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102114555
Entry
102114555         CDS       T02921                                 
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03030  DNA replication
phi03410  Base excision repair
phi03420  Nucleotide excision repair
phi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:phi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102114555 (RFC2)
   03410 Base excision repair
    102114555 (RFC2)
   03420 Nucleotide excision repair
    102114555 (RFC2)
   03430 Mismatch repair
    102114555 (RFC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phi03032]
    102114555 (RFC2)
   03036 Chromosome and associated proteins [BR:phi03036]
    102114555 (RFC2)
   03400 DNA repair and recombination proteins [BR:phi03400]
    102114555 (RFC2)
DNA replication proteins [BR:phi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    102114555 (RFC2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    102114555 (RFC2)
Chromosome and associated proteins [BR:phi03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    102114555 (RFC2)
DNA repair and recombination proteins [BR:phi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     102114555 (RFC2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    102114555 (RFC2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 RCF1-5-like_lid Viral_helicase1 Mg_chelatase AAA_24 Rad17 AAA_11 AAA_assoc_2 RuvB_N DNAX_ATPase_lid AAA_19 nSTAND3 MipZ AAA_18 AAA_5 AAA_28 ABC_tran AAA_25 AAA_30 AAA_23 NTPase_1 MeaB SLFN-g3_helicase RNA_helicase FtsK_SpoIIIE DUF815
Other DBs
NCBI-GeneID: 102114555
NCBI-ProteinID: XP_005525933
LinkDB
Position
Unknown
AA seq 355 aa
MEVDVAEDEKAGPSAGEKRGATDPAGAAPGGSGHYELPWVEKYRPVKLSEIVGNEDTVSR
LEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNK
IKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIE
PIQSRCAVLRYTKLTDAQILARLLKIVEKEDVPYTDDGLEAIIFTAQGDMRQALNNLQST
YSGFGFINSENVFKVCDEPHPLLVKEMIQHCINANIDEAYKILAHLWRLGYSPEDVIGNI
FRVCKTFQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAAPAAS
NT seq 1068 nt   +upstreamnt  +downstreamnt
atggaggtggatgtggcggaggacgagaaggccgggccgtcagcaggcgagaagcgggga
gccaccgaccccgcgggggccgcgcccggcggcagcggccactacgagctgccctgggtg
gaaaaatacagacccgtgaaactgtccgaaatagttggaaatgaagatactgtgagcagg
ttggaggtctttgcaaaagaggggaatgtaccaaatattataattgctggccctccagga
acaggtaaaaccaccagtatcctgtgtttggctcgtgctctgcttggtcctgcattaaag
gatgctgttctggagctgaatgcctcaaatgacagaggcattgatgttgtaagaaacaaa
atcaaaatgtttgcccagcaaaaggtcacacttccaaaaggtcggcataaaataatcatc
cttgatgaagcagacagcatgacagatggagcacagcaagcattgagaagaacaatggaa
atttattccaaaacaacacgcttcgcactggcatgcaatgcctctgacaaaatcatagaa
cctattcagtctcgctgtgcagtgctgcgttacaccaagctgacagatgcacaaatactt
gccaggctactgaaaattgttgagaaagaggatgtgccatatacagatgatggactagaa
gccattattttcacagcccaaggtgatatgagacaggcattgaacaacttacagtccaca
tactctggatttggctttataaacagtgagaatgtctttaaggtatgtgacgagcctcat
cctctgctagtgaaggaaatgatacaacactgcataaatgcaaatattgatgaagcatac
aagattcttgcccacctgtggcgccttggatactctccagaagatgtcattggcaatatc
ttccgtgtgtgtaagacctttcaaatgccagaatatctgaaactggagtttatcaaggaa
attgggtacactcacatgaagatagcagaaggtgtgaattcccttttacaaatggctggg
ctgctggcccggctgtgccagaagactgcagcccctgcagccagttag

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