Pseudopodoces humilis (Tibetan ground-tit): 102114706
Help
Entry
102114706 CDS
T02921
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03030
DNA replication
phi03410
Base excision repair
phi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102114706 (POLE)
03410 Base excision repair
102114706 (POLE)
03420 Nucleotide excision repair
102114706 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phi03032
]
102114706 (POLE)
03400 DNA repair and recombination proteins [BR:
phi03400
]
102114706 (POLE)
Enzymes [BR:
phi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102114706 (POLE)
DNA replication proteins [BR:
phi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
102114706 (POLE)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
102114706 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
102114706
NCBI-ProteinID:
XP_005534123
LinkDB
All DBs
Position
Unknown
AA seq
2291 aa
AA seq
DB search
MGLRDGAEPEAARWGRRPGGPREPEDGAGSSRDDATALSAFKRLERAQRTDRLDALFGFE
RPAEPGERTGWLINMHPTEVLDEDRRSVSAVDYYFIQEDGSRFKVALPYKPYFYIATQKG
CEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVKVRKEIS
PAVRKNREQDQANDVYTTMLSSALSGGSLSTDEEGASKKIANQMENIVDMREYDVPYHVR
LSIDLKIHVAHWYNVRYRGSTYPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDADTD
QIMMISYMIDGQGYLITNREIVSENIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHV
QETKPTIIVTYNGDFFDWPFVEARAAAHGINMYQEIGFQKDSQGEYKASQCIHMDCLRWV
KRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYM
KYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDG
HVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLVQHVEKTLQHAIEEEEGLPLD
QVTNFQEVCDEIKAKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATC
AACDFNKPGANCQRRMMWQWRGEFMPASRSEYHRIQQQLESEKFPPLFPDGPPRAFHELS
REEQAKYEKRRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGL
HKVWKKKLSAAVETGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEM
AGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNIKKPKVTVS
YPGAMLNILVKEGFTNDQYQELQDPASLTYITRSENSIFFEVDGPYLAMILPASKEEGKK
LKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAKVAD
YWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKD
AGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVCKHYLRKWLKSPSLQDFNIRAILDWD
YYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFISEG
KKQVLANRPVEGTPSSQVGDIEDFGAVKIPQPLVPITNKRKRIPAAEESQQLSQDLELSQ
SWREILGPPPPFGTTKEEHLVWLRFHQKKWELQARQRQERRKRRRMEDGGVVAGGGVVRD
APSKGLSSYLRRTARSILDLPWQVVQIAETSQPGLFRLWAVIGSDLHCIKLSIPRVFYVN
QRVPKPEEGAAYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYET
QVPLLFRALIHLGCVCMVSRQLVRHLAGREAETFNIEHLEMCSLAQFTYLEPGSIRHIYL
YHSIKGSKALLGLFIPSQRKAAVFVLDKVRSNQMPNLTTLFSVEREALLEKVGKELLPLD
KHTFEVRAETDPKAIYKGVQRLLLGYKDERRGPTLLAVQSNWDLKQLASGIPIIEEFPLV
PIRLVDDISYSVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGS
DLFFSRHLRRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCLEL
DIQSLAVNTVLQSHHVNDMEGGSSMSISFDVIQQASLEDLVTGNQAANIPASYDETALCS
NTFRILKSMVVSWVKEITQYHNVYADNQVIHFYRWLHSPSSLLYDPALHRTLHNMMKKLF
LQLVAEFKRLGSSVVYANFNRIILCTKKRHIEDAISYMEYIINSIHSKEIFHSLTISFSR
CWEFLLWMDPANYGGIKGKVDSRIHYGEKDTSKRQALEEEEESEEEEEAREEEEEEGEPD
VEELLENSWNIAQFLPQAGSCQSYFLMIISAYIVAVYHNMKEELRCNAPGSTPIKRKSTS
QVSQETLGDLRAMSGMITFSQDYVANELTQSFFTITQKIQKKMAGSQNATEPSDMFPVLP
GSYLPLNNPALEFIKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFSEAAQFRDPCRSY
VLPEVICRNCNFCRDLDLCKDPALSQDRLVLPGWLCPNCHVQYNTDAIETALVEALQKKL
MAFVLQDLVCKKCHGVKETHMPVYCSCAGDFTLTISSQTFMDHVSVFQNIAQHYGMAYLL
ETIEWLLHTNL
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atgggactgagggacggcgccgagcccgaggcagcgcggtgggggcggcggccaggtggg
ccccgggagccggaggacggcgcggggtccagccgtgacgatgccaccgcgctgtctgca
ttcaagcgcctggagcgggcacagcgaacggaccgtctggacgcgctgttcggcttcgag
cggcccgcggagcccggagagcggacgggctggctcatcaacatgcacccgacagaggtg
ctggatgaggaccggcggtcagtgagtgcagtggactactacttcatccaggaggatggg
agccgcttcaaggtggccctaccctacaagccctacttctacattgctacccagaagggc
tgtgagcgggaagtgtcctccttcctctccaagaagttccaagggaagattgcaaagctg
gaaactgtccccaaagaagacttggacctgccaaaccacttggtgggcctgaagaggaac
tatatcaagctctccttcaacacagtggaggacttggtgaaggtgcggaaggagatctct
cctgctgtgaggaaaaacagggagcaggaccaggcgaatgatgtctacacgaccatgctg
tcaagtgctctgagtgggggcagtctaagcacagatgaggaaggagcctccaaaaaaatt
gccaaccagatggaaaacattgtggacatgcgggagtatgatgtcccctaccacgttcgc
ctttccatcgacctgaagatccatgtggctcactggtacaacgtgagataccggggcagc
acctacccccccgaaatcacccgccgagatgaccttgtggaacggccggatcctgttgtt
cttgcctttgatattgaaacaaccaaactccctttgaagtttcctgatgcagacacagac
cagatcatgatgatctcctacatgattgatgggcagggctacctgatcacaaacagggag
attgtctcagagaacattgaagactttgagtttactcccaaacctgagtatgagggtcca
ttttgtgtctttaatgaaccagatgaggctcatttaatccagagatggtttgaacatgtc
caggagaccaaacccaccatcattgtcacatacaatggagacttctttgactggcccttt
gtggaagcaagagcagcagctcatggaattaatatgtatcaggaaattgggtttcagaag
gatagccagggagagtacaaagcatcccaatgcatccacatggactgtctgaggtgggtg
aagagagacagttacctcccagtgggaagtcacaacctgaaagcagcagctaaagcaaaa
ctgggttacgatccagtggagctggaccctgaggagatgtgccggatggccacagaggaa
cctcagacactggccacctactcagtgtccgatgctgttgctacttactacatgtatatg
aagtatgtgcatcccttcatttttgccttgtgtaccatcattcccatggagcctgatgag
gtattaagaaaaggatctgggacactgtgcgaggcactgctgatggttcaggcctaccat
gccaacatcatcttcccgaacaagcaggagcaggaattcaacaaacttacagaagatggg
catgtgctggactcagagacctacgtgggaggccacgtggaggcactggaatctggggtc
ttccgcagtgatattccctgccgcttcaaaatgaatcctgctgccttcgacttcctggtg
cagcatgtggagaagaccctgcagcacgccattgaggaagaggagggtctgcccttggat
caggtcaccaactttcaggaggtttgtgatgaaatcaaggccaaactgaattccctgaag
gatgttcccaacagaattgagtgtcctcttatctatcatctggatgtgggggccatgtac
cccaacatcattctgaccaacaggttgcagccctcagccatggtggatgaggccacttgt
gctgcctgtgacttcaacaaaccgggtgccaactgtcagcgtcggatgatgtggcagtgg
agaggagagttcatgcctgccagccgcagtgagtaccaccgcatccagcagcagctggag
tcagaaaagttccctcccttgttccctgatggaccaccccgtgccttccacgagctctcc
cgggaagaacaagccaagtatgagaaaaggcgtctggcagattactgccgcaaggcatac
aagaagatccatgtcaccaaggtggaggagcgagtcactaccatctgccaaagagaaaac
tctttctatgtggacacggtgcgagcattccgggaccgccgatacgagttcaagggactg
cacaaggtgtggaagaagaagctgtctgcagcagtggagacaggagatgcctctgaagtg
aaacgctgcaagaacatggagatcctctatgactccctgcagctggctcacaagtgcatc
ctcaactccttctatggatatgtcatgcggaaaggagctcgctggtattccatggaaatg
gctggcattgtctgcttcacaggggcaaatatcatcacccaggccagagagctgatcgag
cagattgggagacctctagaactggataccgatgggatttggtgtgtccttcccaacagc
ttcccagagaactttgtcatcaagtcaaccaatatcaagaagccaaaagtgaccgtctct
tacccaggtgccatgctgaacatcctggtgaaggaaggcttcacaaatgatcagtaccag
gaactgcaggatccagcctcactcacctatatcacacgctcagagaacagcatctttttt
gaagtggatggtccatacctggccatgatccttccagcctccaaagaagagggcaagaag
ctgaagaaaaggtatgctgtgttcaacgaggatgggtccctggctgagctgaaggggttt
gaggtgaaacgccggggagaactgcagctggtgaagatattccagtcatctgtgtttgaa
gcctttctaaaaggcagcaccttggaggaggtctacgcttccgtggccaaggtggctgat
tactggctggatgtgctctacagcaaggctgccaacatgcctgattcagagctgtttgag
ctcatctcagagaaccgatctatgtcacgcaaactggaggactacggggagcagaagtcc
acctccatcagcactgctaagcgcctggcagagtttttgggggaccagatggtgaaggat
gcagggctgagctgtcgcttcatcatttccaagaaaccagaagggtctccggtcactgag
agagccatcccccttgccatcttccaagctgagcccagcgtgtgcaagcactatctccga
aaatggctgaagagcccctcactgcaggacttcaacatccgtgcgatcctggactgggac
tactacattgagagattgggcagcaccatccagaaaatcatcaccattccagcagccctg
cagcaggtaaagaacccagttccacgggtccgacacccagactggcttcacaagaaactc
ctggagaagaatgatgtgtataaacagaaaaaaatcaatgagctcttcatttcagaaggc
aaaaaacaggttcttgccaatcggcctgtggaggggacacccagctcacaggtgggtgac
atagaggattttggggctgtcaagatccctcagccactggttcccattacaaataagcgg
aagcgtatccctgcagcagaggaaagccagcagctgtcccaggacctggagctgtcccag
tcctggcgggagattctgggcccacctccaccctttggcaccaccaaggaagagcatttg
gtctggctgcgcttccaccagaagaagtgggagctgcaggctcggcagcggcaggagcgg
cggaagaggaggcggatggaggatggtggggtggtggcaggtggaggagtggttcgcgat
gccccttccaaagggctgagcagttacctgcgccggacagcgcgcagcatcctggacttg
ccctggcaggttgtgcagatcgctgagaccagccagcctgggctcttccggctgtgggcg
gtgataggaagtgacctgcactgcatcaagctgagcatcccccgtgtcttctatgtcaac
cagcgtgtcccaaagcctgaggagggagcagcctacaggaaggtaaacaggatcctgccc
cgctcaaacttagtttacaacttgtatgaatactctgttcctgaagacatgtaccaagag
cacatcaacgaaatcaacgcagacctctctgctccagacatcgagggagtgtatgagaca
caggtgccactgctcttccgtgccctgatccacctgggctgtgtgtgcatggtcagcagg
cagcttgttcgacacctggcagggcgagaggctgaaaccttcaacattgagcacctggag
atgtgctcactggcccagttcacttacctggagccaggaagcattcgccacatctacctg
taccacagcatcaagggcagcaaggcactcctgggcctcttcatcccctcacagcgcaag
gctgctgtcttcgtgctggacaaggtacgcagcaaccagatgccaaacctcaccaccttg
ttctcggtggagcgtgaggctctgctagagaaggtgggcaaggagctgttgcccctggac
aaacacacctttgaggtgcgtgctgagactgaccctaaggccatctacaaaggtgtccag
cggctgctcttaggctacaaggatgagcgccggggccccacgttgctggctgtgcagtcc
aactgggacctgaaacagctggcaagtgggatccccatcattgaggagttccccttggtc
cccatccggctggtagatgacatcagttactcagtcctggactggcagcgccatgctgcc
cgccgcatgattcgccactacctcaacctggacacctgcctctcccaggcttttgagatg
agcaggtactaccacatccccattgggaacctccctgatgacatctccacctttggctct
gacctattcttttcacgccaccttcgtcgtcacaaccacctgttgtggctgtcccctacg
gcccgacctgacctgggggggaaggaggccgatgacaaccgcctggtcatggagtttgat
gagagggcctcagttgagatcaacaatcctggctgctactccacagtgtgtctggagctg
gacatccagagcctggctgtgaacacagtgttgcagtcccaccacgtgaatgacatggaa
ggaggctccagcatgagcattagcttcgatgtgattcagcaggcatccttggaggacctg
gtgacagggaaccaagctgccaacatcccagccagctatgatgagactgccctctgctcc
aacactttcaggattctgaagagcatggtggtgagctgggtgaaggagattacacagtac
cacaacgtctatgcagacaaccaggtcattcacttttaccgctggcttcactctccttcc
tccctgctctatgacccggcactgcaccgcacactccacaacatgatgaagaagcttttc
ctgcagctggtggccgagttcaagcgtctgggctcctctgtggtctatgccaacttcaac
cgcatcatcctgtgcaccaagaagcggcacattgaggatgccatcagctacatggagtac
atcatcaacagcatccattccaaggagatcttccattctttgaccatctcattctcccgc
tgctgggagtttttgctctggatggacccagcaaattatggaggtatcaagggaaaagtg
gattctcgcatccactatggagagaaggacaccagcaagaggcaggcattggaggaggag
gaggagagcgaggaagaggaggaagcaagggaagaagaggaggaggaaggggagccagat
gtggaggagctgctggagaacagctggaacattgcgcagttcctgccccaggctggctcc
tgccagagttacttcttgatgatcatatcagcatacatcgtagctgtgtaccacaacatg
aaggaggaactgcggtgtaacgcgcctgggagtacccccatcaagaggaagagcaccagc
caggtgtcccaggagactctgggggacctgagggccatgtctggcatgatcaccttctca
caagattacgtggccaatgagcttacccaaagcttcttcaccatcacccagaagatccag
aagaagatggctggttcccagaatgccacagagccctcagacatgttcccagtcctacct
ggctcctacctcccactcaacaacccagctctggagttcatcaaatacgtttgcaaggtc
ctctccctggatgccaacataaccaaccaagtgaacaaactacgccgggacctgctgcgc
cttatcgaagtgggcgagttctcggaagcagcccagtttcgggacccttgccgctcctat
gtgcttcctgaagtcatctgcaggaactgcaacttctgcagggatctggacctgtgcaag
gaccctgccctttcccaggacaggttggtactgcctggctggctctgccccaattgccat
gtgcagtacaatactgatgccatcgagacagcactggtggaagccctgcagaagaagctg
atggctttcgtgcttcaggacctggtgtgcaaaaagtgtcatggtgtgaaggagacacac
atgcctgtgtactgcagctgtgctggagacttcaccctcaccatctcctcccagaccttc
atggaccatgtcagtgtcttccagaacatcgcccagcactatggcatggcctacctgctg
gaaaccattgagtggctgctgcacaccaacctctag
DBGET
integrated database retrieval system
