Pseudopodoces humilis (Tibetan ground-tit): 106628877
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Entry
106628877 CDS
T02921
Name
(RefSeq) protocadherin beta-4-like
KO
K16494
protocadherin beta
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phi04515
]
106628877
Cell adhesion molecules [BR:
phi04515
]
Cadherins
Protocadherins
106628877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
106628877
NCBI-ProteinID:
XP_014117940
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MAIARQVLCLSAFLWLPPARAEPIRYSVAEEAESGSLVGELAEDAGLTPAQLSARRARLV
SEDGRQHFALERGSGRLLVAGRLDREELCGQSATCMLPFELLFSNPLQFFRVEVALEDIN
DNSPVFREDRVSFRIPETTEPGSRLPLELARDLDIGSNTVQTYSISPENKYFSISYGTRS
TGKKYLELVLEKPLDREEHAEMSFSLIAVDGGSPPRTGKTEVKIVILDVNDNAPIFTQEV
YIGEVLENMPEGSVVLMVLATDEDAGLNGEISYELSEAVGQSHSTFLIDSITGEIKLTKP
LDFEAAQSHELSVRATDGGGLSAICKVLVEVVDVNDNAPEVVVSSFSSPLPENTAPGTVV
ALFTVRDRDSGANGKISCGLEDQLFFSLRPAYKNYYELVTVSALDREETARYILRVTAAD
AGSPPLTSTQTFTVDISDVNDNAPVFNQTSYTMYVRENNVPTVFVGAVSAADADVGLNGK
VSYSLAAVQAAEGPWCSCVSVNSENGHVFVLRPLDYERLRQTEVTVSASDAGSPPLRANV
SVRLVVLDENDNLLLSNPLQFFRVEVALEDINDHSPFFRGNRLRIRIPETSNPGSRFPLE
VARDLDIGSNTIQAYSISPENNYFSVSYGSRSNGDKYVELVLEKPLDREEHAEMSFSLIA
VDGGSPPKSGTIEISIIILDANDNAPTFKQDHYIVKVLENMTEGSVFLQVLAIDQDA
NT seq
2152 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgcaaggcaagtgctttgtctgtctgctttcctgtggctgccgcccgctcgc
gccgagcccatccgctactccgtagccgaggaggcggaaagcggctccctggtaggcgag
ctggcggaggacgcggggctgacgccggcgcagctctcggctcgccgcgcccgcctggtg
tcggaggacggccggcagcattttgccttagagcgcggctccggccgcctgctcgtggcg
gggaggctggaccgggaggagctgtgcggccagtccgccacctgcatgctccccttcgag
ctgctgttctccaaccccctgcagttctttcgggtcgaggtggctctggaggatatcaat
gacaattcacctgttttccgagaagatcgagttagttttaggatccctgaaacgaccgag
ccaggttcacgtttacccctggagttggctcgggacctcgatattggcagcaacacagtc
cagacatacagcatttctcccgagaacaaatattttagtatctcctatggaactcgaagc
acaggcaagaagtatctggaactggtcttggaaaagccattagacagagaggagcatgca
gagatgagtttcagtctcattgctgtagatggtggctctccccctaggactgggaaaact
gaagtgaaaattgtcattctagatgtaaatgataatgctcccatcttcacacaggaggtg
tacattggtgaggttctggaaaatatgccagaaggctccgtagttctaatggtgttggca
acagatgaggatgcgggacttaatggagaaatctcctatgaactcagtgaagcagtggga
cagagtcactctacatttctgattgattccataactggggaaattaaactcacaaaacct
ctggacttcgaggcagcacaaagtcacgagctgagtgtaagagccacagatggcggggga
ctctcagccatctgcaaagtgctggtggaggtggtggacgtgaacgacaatgccccagag
gtggtggtcagctccttcagcagtcccctccccgagaacacagcacctggcacggtggtt
gccctgtttacggtcagggaccgggattctggggccaacgggaagatctcgtgtggcctc
gaggatcagctcttcttctcgctgcggccagcctataagaattactatgagctggtgaca
gtgagcgcgctggaccgcgaggagacggctcgctacatcctcagggtgacggcagcagac
gcggggtcacctcctctgacgagcacgcagaccttcaccgtggacatctcggatgtcaat
gacaacgcccccgtcttcaaccagacgtcgtacaccatgtacgtgcgtgagaacaatgtg
cccacggtgtttgttggagccgtcagcgctgccgacgctgacgtggggctcaatggcaag
gtgagctattccctggcagcggtgcaagcggcagaggggccttggtgctcgtgcgtgtct
gtgaactctgagaacgggcacgtgtttgtgctgcggcccctggactacgagcgcttgagg
cagacggaggtgacggtcagtgcctctgacgcgggctctcctcccctcagagccaacgtc
agcgtccgcctcgtggtgctggacgagaacgacaacctgctgctctccaaccccctgcag
ttctttcgggtcgaggtggctctggaggatatcaatgaccattcgccttttttccgagga
aatcgattaagaattaggatccctgaaacgagcaaccctggttcacgtttcccgttggag
gtggctcgggacctcgatattggcagcaacacaatccaggcgtacagcatctctcccgag
aataattatttcagtgtctcctatggaagtcggagtaatggagacaaatatgttgaactt
gttttggagaagccactagacagagaggagcatgcagagatgagtttcagtctcattgct
gtagatgggggctctcctcccaaaagtggcaccatcgagatctctattattattctggat
gcaaatgacaatgctcccacattcaaacaggaccattacattgtgaaggttttggagaac
atgacagaagggtctgtgtttctgcaagtgctggcaatagatcaggatgcag
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