Pseudopodoces humilis (Tibetan ground-tit): 106628907
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Entry
106628907 CDS
T02921
Name
(RefSeq) LOW QUALITY PROTEIN: endogenous retrovirus group K member 18 Pol protein-like
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RVT_1
rve
RVT_thumb
RNase_H
Integrase_Zn
RVP
IN_DBD_C
Motif
Other DBs
NCBI-GeneID:
106628907
NCBI-ProteinID:
XP_014118083
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MRHLTITKDILFRTQHWTVVAMDPLEGKKTYTGCDCKYIAIGDTKHTPPEIEISPITFPG
GPEDLILLVRCIHPPYFLPKGQIIAQYIPVPEGVPVDDHAPGINSAEVVGEDKPIVDCSI
KQGAESVNLRGLLDTGADVTIIPQRRWPSHWELQPMAGKIQGSLVGEGPYVTMWGKDRNP
ENPSGFLIAATVERPFQKLDWTTDEAIWIDQWPLRKDKLRALNELMEEQLLKGNIVETTS
LWNSPVFVIRKPGKDKWRLLHDLHAINKIIVDMGPLQPGMPTPTILPRNWDLAGIDIKDC
FFQIPLHPDDAPRFAFSVPTLNREAPMRRXHWRVLPQGMKNSPTICQWYVSSLLSPVRKE
MREVIIHHYMDDVLVCAPHGDLLTRSLDRVVKVLTSAGFQLQEDKVQWMPPWKYLGLRIA
ERTVVPQKLAINSNPKTLADLHSLCGTLNWLRPWLGLSTEDLAPLFTLLKGEKELSSLRI
LTPEARKALEKVEEALVERQAHRCEPTLPFEFIVLGRMPHLSGLIFQWDQGSKDPLLIIE
WVFLSHQRSKSVTQPQELMAQLIGRARARLREMAGCDFACFRVPVSLSRDKETPDKLTKE
MFDQLLTENETLQIALDSFEGQVSVHAPAHKFFNSKFEPIPKEVRSRKPLKALTVFTDAS
GASHKSLVTWRNPKTQQWEADVQYVEGSPQVAELDAVVRAFERFSEPFNLVTDSAYVAGV
VARAEHAALKEVSNPKLFELLSKLIYTVSHRKQPFFVMHVRSHTDLPGPVAKGNQMADSL
AAPVSMAQLPDRFQQAKLSHQMFHQNVPGLVRQFHLRRDQARAIVATCPHCQTTVMPSLG
SGVNPRGLGSCEVWQMDVTHVPEFGKLRFVHVSVDTFSGAVFASAHAGEKAEHVCKHFMQ
AFSVLGVPKELKTDNGPAYTSRKLEEFLQNWGVTHKRGIPHSPTGQAIVDDSNPNPPVAL
HFNSTSNYELKHRPPVLVRDPETQKILGPFDLVTWGRDYACVSLPQGLRWIPQKWVKPYV
PKHSTRPPDEQEDVIVSVQATPVTPKSDEEEECLEPPFSIDFLLSLYVN
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgcgacatctaacaatcactaaggacatcctctttcggacccagcactggacagtagtt
gctatggatccactggagggaaagaagacatatactggatgtgactgtaagtacatcgcc
attggggacactaaacacacacccccagagattgagatctccccgatcaccttcccgggt
ggtccggaagatcttatcctcttagtgcgctgcattcacccaccatattttctcccaaag
gggcaaatcatagcccaatacattcctgtcccagagggagtcccagtggacgaccacgca
ccaggcatcaactcggcagaagtagtgggtgaagacaaacccattgtcgattgcagcatc
aagcagggtgcggaatctgtcaacctgagaggtctgcttgatacgggggcagatgtgacg
atcatcccccagagaagatggccgtcacattgggagttgcaacccatggcggggaaaatt
cagggttcccttgtgggggagggaccttatgtcacaatgtggggtaaagatcgaaatccc
gaaaacccctcgggatttttaatagcggccactgtggagcgccccttccagaagctcgat
tggaccactgatgaagcaatctggattgatcagtggccgcttcgaaaagacaaattaagg
gctctcaatgagctcatggaggagcaattattaaagggtaatattgtagagacaaccagc
ctttggaattccccggtatttgttatccgtaagccggggaaggacaagtggcggctcctc
cacgaccttcatgccatcaataagatcattgttgacatggggccccttcaaccagggatg
cctaccccaactattctcccccgaaattgggatctggccgggattgatataaaggactgc
ttctttcaaattcccttgcaccctgatgacgccccacggtttgccttctcggtgcccacc
ctcaaccgagaagccccaatgaggagantccactggcgtgttttgccacaaggcatgaaa
aattcccccaccatctgtcagtggtacgtctcctcgttgctgtctcccgtgcgcaaagag
atgagggaggtcatcatccatcactatatggatgatgtcctagtgtgcgccccccatggc
gatctactcacccgatcacttgaccgagtggttaaggttttaacatctgcaggttttcaa
ctccaggaggataaagttcaatggatgccgccctggaagtatctgggtctgcggattgct
gagaggactgttgtgcctcaaaaattggcaataaacagcaatccaaagaccttggcggac
cttcactcgctgtgtgggaccttgaactggctcaggccttggctgggcctttccactgaa
gacctagcccccctcttcacactcttgaagggggagaaggagctgagttctctcaggatc
ctgaccccagaagcgaggaaagccctggagaaagtagaggaggcacttgtcgaaagacag
gcgcatcggtgcgaaccgaccctgccttttgagtttattgtgctcgggagaatgccacac
ctcagtgggctgatttttcaatgggaccagggctccaaggatcccctcttaatcatagag
tgggttttcttgagccatcaaaggtccaaaagtgtcacccagccacaggagctgatggct
cagctcatcgggagagctcgggccaggcttcgggagatggctgggtgtgactttgcatgc
tttcgggtaccggtcagcttgtctcgggacaaggagaccccagataagctgacaaaagag
atgtttgatcagttacttacggagaatgagacactccagattgctttggatagttttgaa
ggccaagtttcggtccatgcccctgcccacaaatttttcaattccaaattcgaaccaatt
ccaaaagaagtacggagcaggaagcccctcaaagccctgaccgtgttcacggacgcatcc
ggggcatctcacaagtctctagtgacttggagaaatcccaaaactcagcagtgggaagca
gatgttcaatatgtggaaggatctccacaagttgctgagttggatgcagttgtcagggcc
tttgagaggttttctgaacctttcaatttagtcactgactcggcctatgttgcaggggtg
gttgccagagcagaacacgctgccctgaaggaggtctcgaacccgaaattgttcgagttg
ctttctaaattaatatatactgtttcccacaggaagcaaccatttttcgtaatgcatgtg
aggtcgcacacagatctccctggcccagtagccaagggaaatcaaatggctgattccctc
gctgcccctgtttccatggctcaactccccgatcggttccaacaagccaagctgagccac
caaatgttccatcagaatgtgcctggtctggtccgccagttccacctgcggcgggatcaa
gccagagccattgtggccacatgcccccattgccaaaccaccgttatgccctctctgggg
tcgggggtgaaccctcgaggcctggggagctgtgaggtgtggcaaatggatgtaactcac
gttcccgaatttggcaagctaaggttcgtacatgtatccgtagacactttctcaggggca
gtctttgcttctgcccatgcaggagagaaagccgagcatgtctgtaaacacttcatgcag
gctttctctgtgctgggggtccccaaagagctaaaaacggataatggcccagcatacacc
tccaggaaactggaggaattcctgcagaattggggagtgacacataagagaggcattcca
cactcccccaccggtcaagcaatcgtggatgatagtaatcccaatcctccagtggcactg
cactttaactccaccagcaactacgagctcaaacatcgccctccagtgctggtccgggac
ccagagacccaaaagatcctgggtccgttcgatctggtgacctgggggcgagactacgct
tgcgtttccttgccccagggactaaggtggatcccacaaaagtgggtgaaaccttatgtc
ccgaaacattctaccaggccaccagacgagcaggaggatgtcattgtgtctgtgcaagcc
accccagtaacccccaagagcgacgaggaggaggaatgtctcgaaccccctttctctatc
gattttttgctctccctttatgttaattga
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integrated database retrieval system
