Prevotella histicola: J5A62_00905
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Entry
J5A62_00905 CDS
T07498
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
phis
Prevotella histicola
Pathway
phis03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
phis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J5A62_00905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phis03021
]
J5A62_00905
03400 DNA repair and recombination proteins [BR:
phis03400
]
J5A62_00905
Enzymes [BR:
phis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J5A62_00905
Transcription machinery [BR:
phis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J5A62_00905
DNA repair and recombination proteins [BR:
phis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J5A62_00905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
Sigma70_r4
KORA
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QUB83947
LinkDB
All DBs
Position
1:255443..256909
Genome browser
AA seq
488 aa
AA seq
DB search
MVVYYINKVNDNLRAYSFPFKEGDICMLHEGDIVKTVYIDSEVEDNSIFRDFRYVDTKSL
RGYHFPNIDTILCAPYGRSKAKGDKALVLLLMTDCNGEWLTDFLNDTKAIIEGARDYWDL
TVLRRLTRDENIDIVFETPIEESFIARRPKLAYLSETDNLGNYSEELNLSIGDYCFCHIS
NGIILIQIDKESDIIDNVSDFRLIESVTEPEIMLPLASTILYDTTTIKEDKFLSRFDSIV
KQPKSKSILFCALNDLPLSEDEDVKDYLDVKNESDNFSGNKHLSPFFLEIIGIFEKRIEQ
RNYSILKDLVNGVPRSEVAKKNNLTQERIRQLYKKILEEVKFLLINEIQENDQLRKDNAQ
LHVQTQLYIEEIQRLRSVVKDESLRETTNQFIDINSHVAKLLNTPIQNLNLSARAINVLS
VLGISTFGEIPKIDAAVTLLNVKNSGRKTVYDIEIFIEKFGLQFGMTYNEIVKTLINVDL
SKIAHFLK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggttgtttattatataaataaggtaaatgataatctgcgagcatatagctttcctttt
aaggaaggtgatatttgtatgctccatgaaggagatattgtaaaaacagtttatatcgat
agtgaggtggaagataattctatctttcgagacttccgttatgttgatacaaaatctttg
aggggttatcactttccaaatatagacaccattctttgtgccccatatgggagaagtaag
gcaaaaggcgacaaagctcttgttttgctcctgatgacagattgcaatggagaatggctt
accgacttcctaaatgacacgaaggctattatagaaggtgcacgtgactactgggaccta
acagtccttcgtagattaacgagagatgaaaatatagacattgtttttgaaactcctata
gaagagtcatttatagccaggaggccgaagttagcatacctttctgaaacagataattta
ggaaattactccgaagaacttaacttgtctattggtgactattgtttttgtcatatatct
aatggtattatactgattcaaatagataaggaatccgatataatagacaatgtatcagat
ttcagattgatagaaagtgtcacagagcctgaaatcatgttgccattggcttcaacaatc
ctctatgataccacaactatcaaagaagacaaatttttgtctcgctttgatagcatagtt
aagcagcctaaatccaaatccatcttgttttgtgctcttaacgatttacctttgtctgaa
gatgaagatgttaaggattatttagatgtaaaaaatgaaagtgacaatttttctggaaat
aagcatttgtctccttttttccttgagattataggaatcttcgaaaaaagaatagagcaa
agaaactattccatattaaaagatcttgttaacggggttcctagaagtgaagttgccaag
aaaaataatcttacacaagaaaggatacgacaactatataagaaaatactggaggaggtt
aagtttcttcttataaatgaaattcaggagaatgaccaactacgtaaggataatgcgcaa
ctacatgtacagactcaactatatatagaggaaatacaacgattaagaagcgtagtaaag
gatgaaagtttaagagagactacaaatcaatttatagatattaactcccatgttgcaaaa
ttactcaatactcctatccagaatctgaatctttcagcaagagctatcaatgtactgagt
gttttaggtatctccacctttggtgaaatacccaagattgatgccgcagttactctactt
aatgtgaaaaacagcggtagaaaaacagtctatgatattgaaatttttattgaaaagttt
ggtcttcagtttgggatgacttacaatgaaatagtcaaaacattgattaatgttgattta
agcaagattgcccatttcctcaaataa
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