Prevotella histicola: J5A62_03525
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Entry
J5A62_03525 CDS
T07498
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
phis
Prevotella histicola
Pathway
phis03030
DNA replication
phis03430
Mismatch repair
phis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J5A62_03525
03430 Mismatch repair
J5A62_03525
03440 Homologous recombination
J5A62_03525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phis03032
]
J5A62_03525
03400 DNA repair and recombination proteins [BR:
phis03400
]
J5A62_03525
Enzymes [BR:
phis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J5A62_03525
DNA replication proteins [BR:
phis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J5A62_03525
DNA repair and recombination proteins [BR:
phis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J5A62_03525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QUB84423
LinkDB
All DBs
Position
1:894267..895121
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AA seq
284 aa
AA seq
DB search
MKPNLLKPLVVFDLETTGLDLVSDRIIQISFIKIYPDWKEERENIFINPERPIPSSVVAL
TGISDADVADAPTFKQKAKELADKFSGCDFAGFNSNRFDIPMLAEEFLRAGVDFDFSKCR
LIDMQNIYHKMERRNLAAAYKFYCGRKMEDDFEAHRADQDTEATWRVLQGQLDMYAPENQ
SEEDRVLNNDMEELAEFSKMNDFVDFAGRIVWEDMKDQDGKVLLDATGKVRRHEIFNFGK
YKGWDVAEVLRKDPGYYSWMLASDFTYNTKQVLTRIRLREFNNK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaaacttattgaaaccacttgttgtatttgatttagaaacaacagggctggat
cttgtcagtgaccgtatcattcagatttctttcataaagatttatcctgattggaaggaa
gagagagagaatatttttataaatccagagaggccaataccatcctcggtagttgcattg
acaggaatttcagatgcagatgtggctgatgctccaacatttaagcagaaagcaaaagag
ctcgctgataaattctcaggttgtgattttgcaggtttcaattctaatcgatttgacatc
cctatgcttgccgaggagtttttgcgcgcaggagtagattttgatttctctaagtgtcga
ctaatagatatgcaaaatatctatcataagatggaacgtcgtaaccttgctgctgcttat
aaattctattgtggtaggaaaatggaggatgatttcgaggcacatagagctgatcaggat
acagaggctacgtggcgtgtattgcagggacagcttgatatgtatgccccagagaaccag
tccgaagaggatcgtgtcttgaacaatgacatggaagagttagctgagttctcaaagatg
aatgactttgtagattttgctggtcgtatcgtttgggaggatatgaaggatcaagatggt
aaagttttacttgatgcaacaggaaaagtacgtcggcatgagatatttaactttggcaag
tataaaggatgggatgtagcagaagttttacgtaaggatccgggatactatagctggatg
ttggcaagtgattttacatataatacaaagcaagttttgacgcgtattcgtttaagggag
tttaataataagtaa
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