Prevotella histicola: J5A62_04860
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Entry
J5A62_04860 CDS
T07498
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
phis
Prevotella histicola
Pathway
phis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J5A62_04860 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phis03019
]
J5A62_04860 (rny)
Messenger RNA biogenesis [BR:
phis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J5A62_04860 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
DUF4954
Motif
Other DBs
NCBI-ProteinID:
QUB83158
LinkDB
All DBs
Position
1:complement(1224805..1226346)
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AA seq
513 aa
AA seq
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MSPIVTVIIAAVCLAAGCAGGFALFRYILTGKYKDTMEKAEKAAEVLKEKKLLEVKEKFL
NKKSELEKEVQQRTLKIQQGENRLKQREVALNQRQEEVNRRKQDVDQQQQRVDNEKKLLQ
VKQQDLEKMQEKERIKLEELSGLSSEEAKERLIESLKDQAKLDAASYINEIVDEAKLNAN
QQAKKIVIQTIQRVATETAIENSVSVFHIDSDEVKGRIIGREGRNIRALEAATGVEIVVD
DTPEAIVISAFDPVRREVCRLALHQLVADGRIHPARIEEVVAKVKKQLDNEIIETGKRTA
IDLGIHGLHPELIRIVGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLL
HDIGKVPDEETDLPHAIYGGKIAEKYKEKPDICNAIAAHHDEVEMTTLLAPIVQVCDAIS
GARPGARREIVEAYIKRLNDLEAIAMSYPGVTKTYAIQAGRELRVIVGADKMDDVESEKL
SSEIAEKIQNEMTYPGQVKITVIREIRSVAYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagtccaattgtaacagttataattgctgcagtctgtttggctgcaggatgtgctggt
ggctttgctcttttccgctatatcttgacaggaaaatataaagatacaatggaaaaggca
gaaaaagctgcagaagtattgaaagaaaaaaagcttcttgaagtaaaggaaaagttccta
aataagaagagcgaactggaaaaggaggtccaacaacgcacgctcaagatacaacaagga
gaaaacagactgaagcagcgtgaggttgctttgaatcaaagacaagaagaggttaatcgt
cgtaaacaagatgttgatcagcaacaacagcgtgttgacaatgaaaagaagttgttacag
gttaaacaacaagatcttgaaaagatgcaggagaaggagcgtattaagcttgaggaactt
tcagggcttagctccgaggaagcgaaagaacgcttaatagagagcttgaaagatcaggcg
aagttggatgctgcttcttatatcaatgagattgttgatgaagccaaacttaatgcgaat
caacaagcaaagaagatagttatacagactatacaacgagtagcaacagaaacagctata
gaaaactctgtaagtgttttccatattgatagcgatgaggtaaagggtcgcatcattggt
cgtgaaggtcgtaatattcgtgctttggaagctgctacaggtgtagagatcgttgttgat
gatacgccagaagcaattgtaatttcagctttcgacccagttcgtcgtgaggtttgccgc
ttggcacttcatcagctagttgcagatggacgtattcaccctgcacgtattgaagaagtt
gttgcaaaagtcaaaaagcagcttgataatgagataattgagactggcaagcgtacggca
atcgatcttggtattcacggtttacacccagagttgattcgtatcgttggtaagatgaaa
tatcgttcttcttatgggcagaatcttcttcaacatgctcgtgaaacagcgaacctttgt
gctgttatggcaagtgaattaggtttgaaccccaagaaggcaaagcgtgctggcctattg
catgatattggtaaagttccagatgaggagactgatctgccacacgcaatctacggtggt
aagattgctgagaagtataaggagaaacccgatatttgcaatgctattgctgcacaccat
gatgaggtggagatgacaactcttcttgcaccaattgttcaggtttgtgatgctatctct
ggtgctcgtccaggtgcccgtcgtgagattgttgaagcttacattaagcgcttgaatgat
ttggaagctattgcaatgagttatccaggtgtaacaaaaacatatgcaattcaggctgga
cgtgagttacgtgtaattgttggtgctgataagatggacgatgtagagagtgaaaaacta
agctcagagatagcagagaagattcagaatgagatgacttatcctggtcaggttaagatc
actgtaattcgcgagattcgttctgtggcctatgcgaagtag
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