Prevotella histicola: J5A62_06145
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Entry
J5A62_06145 CDS
T07498
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
phis
Prevotella histicola
Pathway
phis03030
DNA replication
phis03430
Mismatch repair
phis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J5A62_06145 (dnaE)
03430 Mismatch repair
J5A62_06145 (dnaE)
03440 Homologous recombination
J5A62_06145 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phis03032
]
J5A62_06145 (dnaE)
03400 DNA repair and recombination proteins [BR:
phis03400
]
J5A62_06145 (dnaE)
Enzymes [BR:
phis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J5A62_06145 (dnaE)
DNA replication proteins [BR:
phis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J5A62_06145 (dnaE)
DNA repair and recombination proteins [BR:
phis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J5A62_06145 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
DUF6282
Motif
Other DBs
NCBI-ProteinID:
QUB83391
LinkDB
All DBs
Position
1:complement(1535494..1539213)
Genome browser
AA seq
1239 aa
AA seq
DB search
MEDFVHLHVHTNYSILDGQSKVTRLVDKAIADGMKGMAITDHGVMFGIKEFSDYCAKINK
ERKAKGEEPFKPIFGCEMYVARRSMHDKEKDKHDNSGYHLIVLAKNYNGYKNLIKLVSHA
WVDGYYYKPRTDREELEKYHEDLIVCSACIAGEVPNKIIRGDIEGAREACEWYHRVFGDD
YYLELQRHEVKDPTLVANREAYPLQQKANKVLMQFAKEYGVKLVCTNDCHFEDKETAEAH
DHLLCLSTNEDLDDPKRMRYSKQEWFKTRQEMNEVFSDVPEAMANTLEILDKIETYSIDH
GPIMPFFPIPESFGTEEEWEKKFTEADLYKEFTTDENGLNPLSEEEGKKVIARLGGYEKI
YRIKFEADYLAKLAYDGAKKLYGDPLSEEVKEHIRFELHVMKTMGFPGYFLIVQDFINAA
REDLGVMVGPGRGSAAGSVVAYCLGITKIDPLKYDLLFERFLNPDRVNLPDIDTDFDDDG
RGRVLQWVMDKYGHENCAHIITYSTMATKNSIKDVARVEKLPLDVSNALCKAIPERLPDG
MKMNLTNAIKCTPQLQDAEVSEDIRERNTIKYAKMLEGTVRGTGIHACGFIICRNPIDDW
VPVSTATDPDFPEKKVPVTQYDGHVIESTGLIKMDFLGLKTLSELKEACKVIKQTTGDVI
DLDNIPIDDELTYQLYQRGQTIGTFQFESAGMQKYLRELHPTVFEDLIAMNALYRPGPMD
YIPDFIKRKNDPSLVKYDIPCMEKYLKDTYGITVYQEQVMLLSRQLANFTRGESDALRKA
MGKKKKAIVDQMKPKFIKQGQENGHDPQVLEKIWSDWEKFASYAFNKSHATCYSWVAYQT
AYLKAHYPAEYMAALMTRRFSQITEITKLMEECKAMKIATLGPDVNESQIGFGVNKHGEI
RFGLSAIKGMGASAAESIVREREANGPYKDIYDFAERIDLSNVNRKAFESLAYSGGFDSF
GLQREQYFGVTGKGDLFLDTIVRYGQLFQMEKAEQQNSLFGGMDAVAVIHPVAPKSEKWP
TIEKLNKERELVGVYLSAHPLDEYSVVLRNMCNTHCSQIGRNADMTQLSKTDEVTFGGIV
TTVTERFSQKTGKPFGFVTIEDFDGTGELALFGDDWARWNNLLKENYTIFVTAKCQPRYR
NNPSMLELKVQNVEQLYDVKAHRLERFTITVDSVALDEELVSELSTIVDEHVGNTRLYIQ
LRTPENTMITLQSRNKGVNVDRKLIDFITASDKMEFKIN
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttcgtacatttacacgttcataccaattattctattcttgatggtcagtct
aaagtgactcgcttagtggataaggctattgctgatgggatgaagggtatggctattact
gaccatggtgtaatgttcggaatcaaggaattctctgattattgtgccaagataaataag
gaaaggaaagctaaaggggaggaacctttcaagccaatctttggctgtgagatgtatgtt
gcacgtcgttcaatgcatgataaagagaaagataagcatgataattcaggctatcacctt
attgtattagctaagaattacaatggctataagaatcttatcaagcttgtttcacatgcg
tgggttgatggttactattataaaccacgtacagatcgtgaggaattagagaaatatcac
gaagatctgatagtctgttctgcttgtattgcaggtgaagtgccaaataaaataatacgt
ggagatatagaaggagcacgagaagcttgtgaatggtaccatcgagtgtttggtgatgat
tattatttggagctacaaaggcatgaagtaaaggacccaacgttggtagctaaccgtgaa
gcttaccctctacaacaaaaggcaaacaaggtgttgatgcagttcgcaaaggagtatggg
gtcaaacttgtgtgtacaaatgactgccattttgaggataaagagactgcagaagcacat
gatcacttactctgtttgtcaacgaatgaggatcttgatgaccctaaacgaatgcgttat
tcaaagcaggagtggtttaaaacacgtcaagagatgaatgaagtgttctctgatgtgcct
gaagccatggctaatacgttggagattcttgataaaatagaaacctatagtatcgatcat
gggcctataatgcctttcttccccatacctgaaagctttggaactgaggaagaatgggaa
aagaaattcactgaagcagacctatataaggagtttacgacggatgaaaatgggctgaat
ccattgtctgaggaggaaggaaagaaggtcattgctcgcttgggaggttatgaaaagatt
tatcgaatcaagtttgaagctgactatttggctaagttagcttatgatggagctaagaaa
ttgtatggtgatccattgtcagaagaggtgaaagagcatatccgttttgagcttcatgta
atgaaaacgatgggtttccctgggtacttcttgatagtacaggacttcattaacgctgct
cgtgaggacctaggagtaatggttggaccagggcgtggctctgctgcaggctcagttgtg
gcttattgtttaggcattacaaagatagatcctcttaaatatgacttgctgtttgagcgt
ttcttaaaccctgatcgtgtcaatctccctgatattgatacggattttgatgatgatggg
cgtggacgagtgctgcaatgggtaatggataagtatggtcatgagaattgtgcacatatc
attacctattcaactatggcaacgaagaactccattaaggatgttgcacgtgttgagaag
ctacctttggatgtgtcaaatgctctctgtaaggctatcccagaacggttaccagatggc
atgaagatgaatctaacgaatgccattaagtgtactccacagctgcaagatgctgaagtt
agtgaagatatacgtgagcgtaacaccattaagtatgcaaagatgctggaaggaactgtg
cgtggtacgggtattcatgcttgtggttttattatctgtcgtaatcctattgacgactgg
gtaccggtgtcaacggcaacagatccagactttcccgagaagaaagtgcctgtaactcag
tatgacggacatgttattgagtctacaggtcttatcaaaatggacttcttaggactgaag
actttgtctgaattgaaggaggcttgtaaggttattaagcagacaactggtgatgttatc
gaccttgataatatcccgattgatgatgaacttacatatcaactctatcagcgtggacag
acaattggtactttccagtttgaatctgctggtatgcagaagtatcttcgagaactacat
ccaactgtatttgaggaccttatagccatgaatgctctctatcgtccaggtccaatggat
tatattccagactttatcaagcgtaagaatgatccttctttggtgaagtatgatatccca
tgtatggagaagtaccttaaggatacttatggtataacggtttatcaagagcaagtgatg
cttttaagtaggcaattagccaactttactcgtggtgaaagtgatgcacttcgtaaggct
atgggtaagaaaaagaaggctattgtagatcaaatgaagccgaagttcatcaagcaaggg
caggagaatggtcatgatccacaggtgttagagaagatatggagtgactgggagaagttt
gcaagttatgcttttaataagtcacatgctacttgttattcatgggttgcttatcaaact
gcttacttaaaggcccattatccagcagagtacatggctgctttgatgactcgaaggttc
agtcagataactgagattaccaagctgatggaagagtgtaaggctatgaagatagctaca
cttggtcccgatgtaaatgaaagtcagatagggtttggtgttaacaagcatggtgagata
cgtttcggtttgtctgcaataaagggaatgggtgccagtgctgcagagagtattgtacgt
gagcgggaggcaaatggtccctataaggacatctatgactttgcagaacgtattgatctt
agtaatgttaaccgtaaagcttttgagagtcttgcatacagtggaggctttgatagcttt
ggtttacagcgtgaacaatacttcggtgttacaggtaaaggagacttattccttgatact
atagtccgttatgggcagctcttccagatggaaaaggctgaacaacagaattctttgttt
ggtggaatggatgctgtggcagtgatacatccagtggcaccaaagtcagaaaagtggcct
actatagagaagttgaacaaggaacgtgagcttgttggtgtgtatttgtctgcacatcca
ttagatgaatatagcgttgtgttgaggaatatgtgtaatacgcattgctcacagattggt
cgtaatgccgatatgacgcagttgtcgaagactgacgaagtgacatttggcggtatagta
acaactgttacggagcgattctcacagaaaactggtaagccttttggctttgtaaccata
gaagactttgatggtacgggcgaattagcgctctttggcgatgattgggcacgatggaat
aacctgttaaaggagaactataccatctttgttacagcaaaatgtcagcctcgttatcgt
aataatccttctatgttggagctgaaagtccagaatgtagagcagctttatgatgtgaaa
gcacatcgtttggaacgatttacaataacggttgattccgtagcattggatgaagaattg
gtgtcagaactgtcaaccatcgtggatgagcatgttgggaatacccgactttatatccaa
ttgcgcacaccagagaacactatgattacgttgcagagccgcaataaaggtgtgaatgta
gaccgtaagctgattgatttcattactgccagtgacaaaatggagtttaagatcaattag
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