Prevotella histicola: J5A62_08015
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Entry
J5A62_08015 CDS
T07498
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
phis
Prevotella histicola
Pathway
phis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J5A62_08015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phis03019
]
J5A62_08015
03009 Ribosome biogenesis [BR:
phis03009
]
J5A62_08015
Enzymes [BR:
phis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J5A62_08015
Messenger RNA biogenesis [BR:
phis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J5A62_08015
Ribosome biogenesis [BR:
phis03009
]
Prokaryotic type
rRNA helicases
J5A62_08015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
DUF5039
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
QUB83727
LinkDB
All DBs
Position
1:2001431..2003302
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AA seq
623 aa
AA seq
DB search
MKTFEELGVSEEIRRAISELGFEHPMPVQEEVIPYLLGNRNDVIALAQTGTGKTAAFGLP
LLQRIDTNSKETQAIVLSPTRELCLQIADDLKDFGKYIPHLHIAAVYGGASIETQIHQLR
HGVQIIVATPGRLIDLMHRGKARLDKVTNVVLDEADEMLNMGFQESITEILTGVPEDRNT
LLFSATMSRDVERVAKGYLHDYKEIVVGSRNEGAESVNHIYYMVNARDKYLALKRLVDFY
PKIYAIVFCRTKVETQEIADKLIKDGYNAESLHGDLSQQQRDLTMQKFRSHLTQILVATD
VAARGLDVNDLTHVINYGLPDDIENYTHRSGRTGRAGKKGTSISIIHSREKYKVRNIERE
IGKEFVDGTLPSPEEICKKQLFKSMDDILKTDVDEDQIAPYMKDITRQFEYIDKEDIIKK
IVTSTFGRFLNYYKNAPEIEKPSSRSSKEENRSMRGEGRSTRSRGPRKPESGYKRLFVNL
GKADGFYPGEVMQFINKNMHGHQAVGHIDLLSKQSYIEVPERDAQKVMHALDGATYKGRK
VRCNDAEEGGHGRSSGRSTGGRGNKEGRSERRNRRQYDDNMYPSTRKFKKDDWKELMKGA
PAKLKGEEPDFSEEGWARRRPKK
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacatttgaagaattgggcgtcagcgaggagattcgccgcgccattagcgagctt
ggatttgagcatccaatgcctgttcaggaagaagtaatcccttatttgcttggtaatcgt
aatgacgtcatcgcactggcacagactggtacgggtaagacggcggcatttgggcttcca
ttgctacaacgtattgatacgaatagcaaggaaactcaagccattgtgttgagccctacg
cgtgagctttgcctgcaaattgccgatgacttgaaggattttggcaagtacatcccccac
ttgcacatagcagcagtgtatggtggagcatctattgagacgcagattcatcagttaaga
catggagtacagatcattgttgctactccgggacgactgattgacctcatgcaccgtggc
aaagcacgtcttgacaaagtaacaaacgttgtcttggatgaggcagatgagatgctgaac
atgggctttcaggagagtattacggagatcttgaccggtgttccagaggacagaaacact
ttattgttctctgcaacgatgagtcgtgacgtagaacgtgtggcaaaaggctatcttcat
gattacaaagagattgtcgttggaagccgtaatgaaggggcagagagtgtaaaccatata
tattatatggtgaatgcacgcgacaaatatcttgctttgaaacgcttggtagacttttat
cctaagatttatgccattgttttctgccgtactaaggttgaaacacaggagattgcagac
aaactgatcaaggatggatacaatgcagaatcgttacatggtgacctttcacagcagcaa
cgtgaccttacaatgcagaagttccgttcgcatctgacacagatccttgttgcgacggac
gttgcagcacgtggattggacgtgaatgacctcacacatgtcatcaactatggcttacct
gatgacatagagaactacactcaccgctcgggtcgtacgggtcgtgcaggcaagaagggt
acatctatctccatcatccactcacgtgaaaagtataaggtacgcaatattgagcgtgag
attggcaaggaattcgttgacggaacactcccttcacctgaagaaatctgtaagaagcaa
ctcttcaagtcaatggatgatattttgaaaactgatgttgacgaagatcagatcgctcct
tatatgaaggatattacccgccaatttgagtatatagacaaggaagacatcatcaaaaag
attgttacttcaaccttcggacgcttcctgaactactataaaaacgctcctgaaatagag
aaaccatcatcacgtagctcgaaagaggagaaccgtagcatgcgaggagaaggcagaagc
acccgtagtcgtggtcctcgtaagcctgagagtggctacaaacgcttgtttgtgaacctt
ggtaaggctgacggtttctatccgggtgaggtgatgcagttcatcaacaagaacatgcat
gggcatcaggctgtaggtcatatcgaccttctttctaagcaaagttacattgaagtgccc
gaacgggacgcccaaaaggtaatgcatgcactagatggcgctacatataaaggccgtaaa
gtgcgttgtaacgatgctgaagaaggcggacatggtcgtagttcaggccgttctacaggt
ggtcgcgggaacaaggaaggacgtagcgaacgtcgcaatcgtcgtcaatatgatgacaac
atgtatccttccacacgcaaattcaagaaggatgactggaaagaacttatgaaaggagca
cctgcaaagctgaaaggtgaagaaccagacttctcagaagagggatgggctaggcgcaga
ccaaagaagtaa
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