Prevotella histicola: J5A62_08210
Help
Entry
J5A62_08210 CDS
T07498
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
phis
Prevotella histicola
Pathway
phis03030
DNA replication
phis03410
Base excision repair
phis03420
Nucleotide excision repair
phis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J5A62_08210 (polA)
03410 Base excision repair
J5A62_08210 (polA)
03420 Nucleotide excision repair
J5A62_08210 (polA)
03440 Homologous recombination
J5A62_08210 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phis03032
]
J5A62_08210 (polA)
03400 DNA repair and recombination proteins [BR:
phis03400
]
J5A62_08210 (polA)
Enzymes [BR:
phis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J5A62_08210 (polA)
DNA replication proteins [BR:
phis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J5A62_08210 (polA)
DNA repair and recombination proteins [BR:
phis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J5A62_08210 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J5A62_08210 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
DNA_pol_lambd_f
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QUB83763
LinkDB
All DBs
Position
1:2053232..2055994
Genome browser
AA seq
920 aa
AA seq
DB search
MAKLFLLDAYALIYRSYYAFLKNPRINSKGLNTSAVMGFCNTLNEVLTKEKPTHIGVAFD
HGKTFRHDAFPQYKAQREETPEDIKLSVPIIKQVLEAMHIPILQVDGFEADDVIGTVATH
FGSDGIETFMLTPDKDYGQLIGPNVFMYRPRHGGGYETLGEKEVEAKYGIPTPAQVVDLL
ALMGDSADNFPGCPGVGEKTAAKLINQFGSIENMLQHTDEIKGKLRDKVENAIEDIKMSK
FLATIRTDVPIQLQLDELKLEQPDEGKLRAIFEELEFKTLINKFLNKSEAKQKSEEKQLD
LFAINTPQSPEEPKDANFESLKTTQYEYKLIENEDDARRICDFFRTKEFVSLDTETTSTD
AISAELVGLSFSVEEKKAFYVAIPANREEALRYVQIFKPLYEDDKIMKIGQNIKYDYEVL
SNYGVTLKGKMFDTMIAHYLIQPELHHNMDYMAETLLHYKTIHIEDLLGPKGKKQKNMRD
LSPADIYEYAAEDADITLRLKNVLEPKLKELSVERLFWDIEMPLVRVLADMELSGVRLDT
DALQETSRIFTERMSQYEQEIYKEAGEEFNISSPKQVGDILFGKMQIMDKPKKTKTGQYV
TSEEVLQSLEAKHPIVRNILNYRGMKKLLSTYVDALPKLINPQTGHIHTSFNQALTATGR
LSSSDPNLQNIPVRTDDGKEIRKCFIPEEGCLFFSADYSQIELRIMAHLSEDENMMEAFR
EGYDIHRATAAKIWHEDIDKVTDAQRKKAKQANFGIIYGITTFGLAQRMGIPNNEARELI
QDYFRTFPKVQAYMEQAKEVARAKGYAETLFHRRRYLADINSRNATVRGFAERNAINAPI
QGTEADIIKVAMVRIWKRFKEEGIRSKMILQVHDELNFSVYPEEREKVEQIVIEEMQNAY
PLNVPLIADAGWGKNWLEAH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaactattcctcctcgacgcatatgcgctcatctatcgttcctattatgctttc
cttaagaatccaagaatcaactctaagggattaaatacatcagccgtaatgggcttctgt
aacacgctaaatgaggtgcttacaaaggagaaaccaacgcatataggcgttgcttttgac
catggaaagactttcagacatgacgcttttccacaatataaggcacaaagggaggaaaca
cctgaggatattaagctctctgtacccatcatcaaacaggtgttagaagcgatgcacata
cctatcctgcaagtagatggctttgaagctgatgacgttattggtactgttgcaacacac
tttggttccgatggaatcgagacttttatgcttacacccgacaaagactatggtcagttg
attggtccaaacgtctttatgtatcgtccccgccatggtggaggttacgaaacattaggt
gaaaaagaggtagaagcaaaatatggcatccctaccccagcccaagtagtcgacctactg
gcactgatgggtgattcagcagataactttccggggtgtccaggggttggtgagaaaact
gcagccaagctaattaatcagttcggaagcattgagaacatgctccaacatacagatgag
ataaaaggaaaactacgggataaagttgaaaatgcaatcgaagacatcaaaatgtcaaag
ttccttgcaaccattcgtactgatgttcccatccaacttcaattagatgaactcaaattg
gagcaacccgatgaaggtaaactacgtgccatttttgaggaattagagttcaaaacactt
attaacaagttccttaacaaaagcgaagcaaaacaaaaaagtgaagaaaaacagcttgat
ctctttgcaataaacacgccccaatccccagaagaaccaaaagacgcgaattttgagagc
ctaaaaacaacacaatacgaatacaaactgattgaaaatgaggatgatgcacgtcgtata
tgtgacttttttaggacaaaagagtttgtaagtttagacacagagaccacttctaccgat
gcaattagtgccgaattggtgggcttaagcttctctgttgaagaaaagaaagcgttttat
gtcgcaataccagccaatcgtgaagaagcgttaagatacgttcaaatattcaaaccattg
tatgaggacgacaaaatcatgaagattggacagaacatcaaatatgattatgaagtctta
agcaactatggtgtgaccctaaaaggcaagatgtttgacacgatgattgctcattacctc
atccaaccagagctccatcacaacatggactacatggctgagacactactccactataaa
acaatccatattgaagacctattaggacccaaagggaagaagcaaaagaacatgcgcgac
ctctctccagcagacatttatgagtatgctgcagaagatgccgacattactttgcgcctg
aaaaacgtactcgaaccaaagctgaaagagctaagtgtcgagagattgttctgggatatt
gagatgccactcgtacgtgtactggctgatatggagcttagtggtgttcgtttggacaca
gatgcgctccaagaaacatcaaggattttcactgaacgtatgtctcaatacgagcaagag
atatacaaagaagcaggagaagaattcaatatatccagcccgaaacaagtgggtgatatc
cttttcggcaagatgcagatcatggacaaacccaagaagaccaagactggacaatatgtc
accagcgaagaggtgctacagagcctcgaagcaaagcatccaatcgttcgtaacatcctc
aattatagagggatgaagaagcttctcagcacatacgttgacgctcttcctaagcttata
aacccacaaacaggacacatccacacctctttcaatcaagcattgacagccaccgggcgt
ctctcatccagtgatcctaacctccagaacatccctgttcgtactgatgatggtaaggag
atacgcaagtgtttcataccagaagaaggttgtttgttcttttccgcagattacagtcag
attgaattgcgtattatggcacatctttctgaagacgaaaacatgatggaagctttccgt
gaaggttatgatattcaccgtgcaacagctgcgaagatatggcatgaggacattgacaag
gtcactgatgcccaaagaaagaaagccaaacaagccaatttcggtattatatatggtatt
acaacctttggtcttgcccaacgaatgggtattccaaacaatgaagcaagggaactcata
caggattatttccgcacattcccaaaggttcaggcttatatggagcaggctaaagaagta
gcaagagccaaaggctatgccgaaactctcttccatcggcgtcgctatctggctgatatc
aatagcagaaatgccaccgttcgtggatttgctgagcgtaatgccatcaatgcaccgata
caaggaacagaagctgatatcatcaaagtggctatggttcgtatctggaagcgtttcaaa
gaagagggaatccgttcaaaaatgatactacaagtacacgatgaacttaacttttctgtc
tacccagaagagcgggaaaaagtagaacagattgtcattgaggagatgcagaacgcctat
ccgttgaacgtaccactgattgctgatgcaggatggggcaagaactggttggaagctcac
taa
DBGET
integrated database retrieval system
