Prevotella histicola: J5A62_09600
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Entry
J5A62_09600 CDS
T07498
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
phis
Prevotella histicola
Pathway
phis03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J5A62_09600 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phis03400
]
J5A62_09600 (uvrA)
DNA repair and recombination proteins [BR:
phis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J5A62_09600 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J5A62_09600 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
AAA_15
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND1
AAA_33
Viral_helicase1
AAA_18
AAA_14
AAA_22
cobW
ATPase_2
BCA_ABC_TP_C
AAA_5
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QUB85144
LinkDB
All DBs
Position
2:complement(335740..338583)
Genome browser
AA seq
947 aa
AA seq
DB search
MNDKIEVFGARVHNLKNVDITIPRNSLTVFTGLSGSGKSSLAFDTIFAEGQRRYIETFSA
YARNFLGGMERPDVDKITGLSPVISIEQKTTNKNPRSTVGTTTEIYDYLRLLFARAGEAY
SYMSGEKMVRYTEEKVVDMIMSDYQEHKIYILAPLVRNRKGHYRELFEQMRRKGYLYIRV
DGEVQELTRGMKVDRYKNHNIEVVIDKMKLGGQDAETLRERLSKTVSTAMKQGDGLIMIL
NNESGEAKYFSKRLMDPITGIAYKDPAPNIFSFNSPEGACPHCKGLGVIDEIDLKKVIPD
TKQNIYSGAIIPLGKYKNQMIFWQIEAILKKYDCTLKTPVKDIPKEAMDEVLYGSLDKLK
IAKELVHTTSDYFVSFDGIIKYLSTVMENDDSSAGKKWADQFIAEAPCPECHGQRLNREA
LSYKIWDKNIAELASMDITELQEWTDHVEEHMDEKQKRIASEIVKEIRKRINFLLEVGLD
YLSLNRQSATLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLINSLKELRD
MGNTVIVVEHDEDMMRAADWIVDIGPKAGRKGGEVVFQGKPSDMLKTHTLTAQYLNGERI
IEVPKERRKGNGKDIKLIGCTGNNLKNVDVSLPLGDLIVVTGVSGSGKSTLINETLQPIL
SQHFYRSLKRPMPYKEIKGIDNIDKVVNVDQSPIGRTPRSNPATYTGVFSDIRQLFVNLP
EAKIRGYKPGRFSFNVKGGRCETCGGNGYKTIEMNFLPDVMVPCEVCHGKRYNRETLEVR
FKGKSIADVLDMTVNMAVEFFENVPQILPKIKALQDVGLGYIKLGQSSTTLSGGESQRVK
LATELSKRDTGKTLYILDEPTTGLHFEDIRILMDVLQKLVDRGNTVLIIEHNLDVIKLAD
YIIDMGPEGGRGGGRVLACGTPEEVAKNKESYTSRFLDKVLKSAKRK
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataaaatagaagtcttcggcgcaagagtacacaacctgaagaatgtagatata
accattccacgcaattctctcactgtttttacagggctatcgggctctggtaagagttca
cttgcatttgatacgatctttgcagaggggcaacgtcgctatatagagacgttctctgcc
tatgcacgtaacttccttggaggaatggaaagacctgatgttgacaagataacggggctt
tctcctgttatttctatcgaacaaaagaccactaacaagaacccacgttcaactgtcgga
accaccactgagatttatgattacctgcgtttgctcttcgcaagggctggtgaagcctac
tcatacatgagtggtgagaagatggtaaggtacactgaagagaaagttgtggacatgatc
atgagcgattatcaggaacataagatctatatccttgctcctttggtcagaaatcgtaag
ggtcattaccgtgaactgttcgaacaaatgcgccgaaagggctacctttacatccgtgtt
gacggtgaagtgcaggagctgacacgtggtatgaaggttgatagatacaagaatcacaac
attgaggtggtcattgacaagatgaaactcggtggtcaggatgctgaaacactgcgtgaa
cgactctcaaagaccgtctctactgcgatgaagcagggtgatggactcatcatgatactt
aataatgagagtggagaagccaagtatttctcaaaaagactcatggatcctataacggga
atagcctataaggaccctgcaccgaacattttctcattcaattctcctgaaggagcgtgc
ccacattgcaagggtttgggcgtcattgatgagatagatttgaagaaagtcataccagat
acgaagcaaaacatctattctggtgcaatcattcctttaggaaaatacaagaaccagatg
atattctggcagatagaagcaatactaaagaagtatgattgtacactgaagacccctgta
aaggacatccctaaggaggcaatggacgaggttttatatggctcattggacaagttgaag
attgcaaaggagcttgttcacaccacatccgattactttgtttccttcgatggtatcatc
aagtacctttcaacagtgatggaaaacgatgactcaagtgcaggaaagaagtgggcagac
cagttcattgctgaagctccatgccctgaatgccatggtcagagactgaatcgtgaggcg
ctgtcttataagatttgggacaagaacattgctgaattggcaagcatggacataacagaa
ctgcaggaatggaccgaccatgtggaggaacatatggacgaaaagcagaagcgtatagca
tcggagattgtgaaagagatacgcaagcgcatcaactttcttctggaagtgggacttgat
tatctgtcactgaaccgacagagtgcgaccctttcgggtggtgagagccaacgtatacgt
cttgcaacacagattggttcgcagcttgtcaacgtcctttacatccttgatgagccttca
ataggtttgcatcagcgtgacaatgaacggctcatcaactccttgaaggagctaagagac
atgggtaacacggtcattgtcgttgaacacgatgaagatatgatgcgtgctgccgactgg
atcgtggacattggtcctaaggctgggcgtaaaggaggcgaagttgtcttccaaggtaaa
ccctcagacatgctgaagacacacacacttacagcccaatatctgaacggagaacgtatc
attgaagttccaaaggaacggagaaagggtaatggtaaggatatcaagctgataggttgt
acggggaataaccttaaaaacgtggatgtcagcttaccacttggcgaccttatcgtcgtc
actggtgtgtctggttcgggtaagagtacgctcatcaatgagacacttcagcctatcttg
tcgcagcatttctatcgttctttgaagcgaccaatgccttataaggaaataaaaggtatt
gataacatagacaaagtggtcaatgttgaccagagtcctatcggtagaacgccgcgcagt
aaccctgcaacgtatacgggagtgttctctgatatccgtcaactcttcgtcaatctgccc
gaagctaagatacgtggatacaagccgggacgcttctccttcaacgtgaagggcggccgt
tgcgagacatgtggtggtaatggatacaagacaatagagatgaatttcttacccgatgtc
atggttccatgtgaagtatgtcatggtaagcgatataaccgtgagacattagaggttcgc
tttaagggaaaatccattgctgacgtgctggatatgacggttaatatggctgtagaattc
ttcgagaacgttccccagattcttccgaagatcaaagctttacaggatgtaggcttaggt
tatatcaagctcggacaaagctctactaccctttctggtggtgaaagtcagcgtgtgaag
cttgcaacagaactctcaaagcgcgacactggcaagacactctacatccttgatgaacct
acaacgggccttcacttcgaggatatacgtatcttaatggatgttttacagaagcttgta
gaccgtggtaacactgttctcatcatcgaacacaacctggatgtcatcaaacttgccgac
tatatcatcgacatgggacctgaaggaggacgcggaggaggccgtgtgctggcatgtgga
acgcccgaagaggttgcaaagaacaaagagagctatacctcacgcttccttgataaggtg
ctgaagagtgctaaacggaaataa
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