Prevotella histicola: J5A62_09625
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Entry
J5A62_09625 CDS
T07498
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
phis
Prevotella histicola
Pathway
phis03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J5A62_09625 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phis03400
]
J5A62_09625 (uvrA)
DNA repair and recombination proteins [BR:
phis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J5A62_09625 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J5A62_09625 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
SMC_N
AAA_21
nSTAND1
UvrA_DNA-bind
AAA_29
AAA_16
DnaJ_CXXCXGXG
RsgA_GTPase
NACHT
ATPase
Viral_helicase1
AAA_25
DUF3987
Motif
Other DBs
NCBI-ProteinID:
QUB85149
LinkDB
All DBs
Position
2:complement(344115..346973)
Genome browser
AA seq
952 aa
AA seq
DB search
MNKYIEVKGARVNNLKNIDVKIPQGQFIAITGVSGSGKSSLAFDTLYAEGQRRYVESLSA
YARQFLGRMSKPEVDFIKGLPPAIAIEQKVISRNPRSTVGTSTEIYEYLRLLYARIGRTF
SPISGEEVKHHSVDDVIEKVMTYSEGTKFCILAPLHVVEGRTAEAQLEMEMQEGYARIYV
DGDFIRIEDWLAQHVVDKEKKPSKKEGEGIYLVIDRMSVEDSKDMRSRLTDSCETAFYEG
DGNMQLMILPAKLTYNFSTRFEADGIRFEEPNDNMFSFNSPLGACPTCEGFGRIIGIDEK
LVITDSSLSVYDGCVQCWHGDKMIWWKDEFCRRAAKDNFPIFKPYYELTKDEKESLWKGL
PSERKMDIHDRVCIDSFFQMVKENQYKIQYRVMLSRYRGKTVCPDCHGTKLKKEASWVKI
GGKAITDLVDMPIINLKEWFDKLKLTDHEQEVSKRLMTEIKNRLQFLLDVGLGYLTLNRQ
SNSLSGGESQRINLTTSLGSSLVGSLYILDEPSIGLHSRDTDRLIHVLKELQALGNTVIV
VEHDEEIMRAADYLIDVGPDAGRLGGEIVFEGKVSDIKRTDGKKDAETQQLLEKYPRSYT
IKYLTGTEVIDVPKSRRPWNMAIELKGARMNNLKGVDVKFPLNVLTVVTGVSGSGKSSLV
KGILYPAMKRHLDEVADFPGEYSSLGGDWKQIKHVEFVDQNPIGKSTRSNPATYVKAYDE
IRKLFAEQPLSKQMGFTPQFFSFNAEGGRCEECKGAGVITVEMQFMADLVLECEECHGQR
FKREILDVQFHGKNINDVLNMTVSEAIQFFGEHKRKAIVNRLKPLEDVGLGYIKLGQSSS
TLSGGENQRVKLAYFIGQEQQQATLFIFDEPTTGLHFHDIQRLLQAFNALIERGHTVLVI
EHNLDVIKCADHVIDLGPDGGDKGGRLVVAGTPEDVAKCKESLTGKYLKDKL
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatatatagaagttaaaggagcaagggtaaacaacctcaagaacattgatgta
aagatacctcaaggacagttcattgccatcacgggagtatctggttcggggaagtcttca
cttgcttttgacacgttatatgccgagggacagcgccgatatgtagagagtttgtcggct
tatgcacgccagttcctgggcagaatgtcaaaacctgaggtcgatttcatcaagggattg
cccccagcaatagccattgagcagaaggttatatcacgtaatccacgttcaacagtgggt
acttcgactgaaatatacgaatacttgcgtttactttatgcacgtattgggcgtactttc
agccctatttcaggcgaagaggtgaaacatcactccgtagatgacgtcattgagaaggtc
atgacctactctgaaggaacgaaattctgcatccttgcaccgttacatgtcgtggaagga
cgtactgcagaggctcaactcgagatggaaatgcaggaaggttatgcacgaatctacgta
gatggcgacttcatccgtattgaagactggcttgctcagcacgttgttgacaaggaaaag
aagccttcaaagaaggaaggagaagggatttacctcgtgattgaccgtatgtcggtggaa
gattccaaagacatgcgatcccgtttaacggactcttgcgagacagctttttatgaaggc
gacggcaatatgcagctgatgatactgccagctaagctgacttacaacttttcaacgcgc
tttgaggctgacggcatacgctttgaggaacctaatgacaatatgttctccttcaattct
ccccttggtgcctgtcccacatgtgagggtttcgggcgtatcatagggatagatgagaag
ctggttatcaccgattcatctctatctgtatatgatggatgtgtgcaatgttggcatggc
gacaagatgatatggtggaaagacgagttctgcagacgtgctgcaaaggacaatttcccc
attttcaaaccgtattatgagctgacgaaagacgaaaaagagagtctttggaagggtcta
ccaagtgaaagaaagatggatatacacgacagagtgtgcatagattccttctttcagatg
gtcaaagagaaccagtataagattcaatatcgagtcatgctgagtcgatacaggggtaaa
acggtgtgtccagactgccatggtacgaagctaaagaaggaagcttcatgggtgaagatt
ggtggaaaagccatcacagaccttgtggatatgccaataatcaacctcaaagaatggttt
gataagctcaaactgactgaccatgaacaggaagttagtaagcgattgatgacagaaata
aagaacagactgcagttcttgctggatgttggattaggttatctgacgctcaaccgccag
tctaattccctcagtggtggtgaaagtcagcgtataaacctcactacttcacttggttct
tcgctcgttggctctctttacatcctcgatgaaccgtcaataggactgcacagtcgtgac
accgaccgcctcattcacgtgctgaaagaactacaggcactgggcaatacggtcattgtt
gtggagcatgatgaggagattatgcgtgctgcagactatcttatagacgtcggaccagat
gcaggaagacttggaggagagattgttttcgaaggaaaagtaagtgatataaaacgaact
gatggtaagaaagatgctgaaacacagcagttgttggagaaatatccacgttcttacacc
ataaaatacctcaccggaactgaagttatagatgttcctaagagccgaagaccatggaat
atggcaatagaactcaagggtgcacgtatgaataacctcaaaggtgttgacgtgaagttc
cccttgaacgtgctgacagtggtcactggcgtcagtggaagtggtaaatcctcgctcgta
aagggtatcctctaccctgctatgaagcgtcatttggatgaagttgccgacttcccaggt
gaatattcgtcccttggtggcgactggaaacagataaaacatgtggaatttgttgaccag
aaccctatcggaaagagtactcgttcgaatccagctacctatgttaaggcatatgatgag
ataagaaagctctttgccgagcagcctctttcaaagcagatgggcttcacgccacagttc
ttctccttcaatgcagagggcggaagatgtgaggaatgtaagggagcaggcgttatcacg
gtggagatgcagttcatggcagaccttgtactggagtgtgaagagtgccacggacagcgc
ttcaaacgtgagattcttgatgttcagttccacgggaagaacatcaatgacgtgctgaac
atgaccgtttcggaggctatacagttctttggagagcataaacgcaaggcgattgtcaac
cgactgaagccacttgaagatgtcggactgggttatatcaaactcggacaaagctcttca
accctctcaggtggtgagaatcagcgtgttaaactggcttatttcattggtcaggagcag
caacaagccacgctcttcatctttgatgagccaacaacgggtctgcatttccatgatatt
caacgattgcttcaggctttcaatgccctgattgaacgtggacacacggtgcttgtcatt
gaacataaccttgatgttatcaagtgtgctgaccatgttatcgacctgggacctgatggt
ggagacaaaggtggacgccttgttgtggcgggaacaccagaagatgtggcgaaatgtaag
gagagtctgacgggtaaatatctgaaagataaactctaa
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