Guptibacillus hwajinpoensis: LC071_02775
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Entry
LC071_02775 CDS
T09276
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
phj
Guptibacillus hwajinpoensis
Pathway
phj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LC071_02775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phj03019
]
LC071_02775
03400 DNA repair and recombination proteins [BR:
phj03400
]
LC071_02775
Enzymes [BR:
phj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LC071_02775
Messenger RNA biogenesis [BR:
phj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LC071_02775
DNA repair and recombination proteins [BR:
phj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LC071_02775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WLR60319
LinkDB
All DBs
Position
complement(565338..566876)
Genome browser
AA seq
512 aa
AA seq
DB search
MVLTDLLYKHFGYREFRQGQQEIILDVLEGKDVFAMLPTGAGKSLCYQLPAYAGLAHILI
VSPLISLMEDQVQQLKAQGEKRVVALNGFLPFEKRISILKNLSRYTFIYVSPEILQNKFV
QDALTQLDLGLMVVDEAHCISQWSHDFRTDYLKLGVIRDKLGKPPVLALTATATDEVRND
VMDQLHMKIPAIHIHSVDRPNIAIKLDKMPSLETKIQSLKRYANELEEPGIIYFSSRNWA
DRIAKELNDDVKTVASYHAGMEQEDRLLIQQQFLNDELSIVCSTNAFGMGINKSNIRFVI
HFHPPATIESYLQEIGRAGRDQNQAIAIHLFTEEDEFLPLSFIDGELPKEVQIKEVMRDL
SSRSGETYSSNQIENEGAKFGLNETAWRYLFHRLEVEGVIEDKVIRSFEVDSTLKKIIDE
TEIRRKEKLVKWFGFKSWLEEEQCRRKGLLARFGETNHLINPCCDYCGLNLEDYAASYDQ
CDSSPQEEFDWDAELKRMLTVCGEGTSEKPTG
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggttttaacagacttgttatacaagcattttggataccgcgaatttcgtcaaggacag
caggaaatcatcttggatgtgctagagggaaaagacgtttttgcaatgcttcctacaggt
gcaggtaaatcgctatgttatcaacttccagcatatgcaggcctggcacatattcttatt
gtttcgcctctcatatcgttaatggaagatcaagtacagcaattaaaagcacaaggagaa
aagcgagtcgttgctttaaatggttttcttccctttgagaaacgaatctcaattcttaaa
aacttatcgcgttacacctttatttacgtatcaccagaaattcttcaaaataagtttgtg
caagatgctttaactcaattggatttagggttaatggtcgtagatgaagcacattgtatt
tctcaatggagccatgattttcgaacagactatttaaaacttggtgtgattagagacaag
cttggtaaacctccggttcttgcgttaacagctacagctacagatgaagtacggaatgat
gttatggatcaattgcacatgaagatacccgctattcatatacacagcgtcgatcgacct
aacattgctattaagctagataaaatgccttcacttgaaacgaaaatccaatcgttaaag
cggtatgctaatgagttagaagagcctggaatcatctatttctcaagcaggaactgggct
gatagaattgctaaagaattaaatgatgacgtgaaaaccgtagcatcttatcacgcagga
atggagcaggaagatcggttattaatacagcagcagtttctaaatgatgagctatccatt
gtttgctcgacaaatgcttttggaatgggcattaacaagagcaacattcgatttgtgatt
cattttcatcccccagctacaatcgaaagctatttgcaagaaattggtcgagcgggaagg
gatcaaaatcaagcgatagctattcacttgtttacagaagaagatgaatttctacccctt
tcatttattgatggagaactacctaaagaggtgcaaattaaagaagttatgagagactta
tctagccgatcaggtgaaacatattcaagtaatcaaatagaaaatgaaggcgcgaagttt
gggttgaatgaaacggcgtggcgttatttgttccaccgtctagaagttgaaggagtgata
gaggataaagttattcgctcttttgaggtcgattctactttaaagaaaataatagatgaa
acagaaatccggcgcaaagaaaaacttgttaagtggtttggcttcaaaagctggttagaa
gaagagcagtgtcgaagaaaaggtttattagctaggttcggtgaaacgaatcatcttatt
aacccatgttgtgattattgtggtttaaaccttgaagattatgcggctagttatgatcaa
tgtgattcctcaccacaagaagaattcgactgggatgctgaactgaaacggatgttgaca
gtgtgcggggagggtaccagtgagaaaccgacaggctga
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