Guptibacillus hwajinpoensis: LC071_14335
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Entry
LC071_14335 CDS
T09276
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
phj
Guptibacillus hwajinpoensis
Brite
KEGG Orthology (KO) [BR:
phj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phj03009
]
LC071_14335 (rlmD)
Enzymes [BR:
phj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LC071_14335 (rlmD)
Ribosome biogenesis [BR:
phj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LC071_14335 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_15
Methyltransf_25
MTS
UPF0020
Cons_hypoth95
Methyltransf_32
Methyltransf_11
DUF2023
Ubie_methyltran
TehB
Motif
Other DBs
NCBI-ProteinID:
WLR58375
LinkDB
All DBs
Position
2831775..2833181
Genome browser
AA seq
468 aa
AA seq
DB search
MDNKNVKGTGLTNGQTIPLTIKRLGINGEGVGFFKRTVVFVPGALPGEEITAEVTKVFSN
RAEAKIKRLRKKSNDRTTPPCPVYEECGGCQLQHLSYEAQLREKRDIVIQSFERHAKLGE
KDITIKPVIGMKDPWNYRNKSQLQVRKQKGKVIAGLYGAGSHELVELTNCLVQHPETNRV
TRQVVKILEDLNITIYHEKKRKGLVRTIVTRVGFETGQIQLVLVTSEENIPRKELLIKEV
KKRLPEVKSVIQNVNGQRTSLIFGDKTFVLDGEEVIEESLGDLNFELSARAFFQLNPTQT
IHLYDEVKKAAALTGKENIIDAYCGVGTIGLWLADNAREVRGMDVIKESIDDARKNAKSH
GYQEKMTYDVGKAEEVVPKWIKEGFKPNVIVVDPPRTGCDETLLVTMVKAKPDRIVYVSC
NPSTLAKDSSYLMKKGYELQHLQPVDMFPQTSHIEVVSVFKRNTGNKK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
ttggataacaaaaatgtgaaagggacagggcttacgaacggtcaaacaatccctttaaca
attaaacgattggggataaatggagaaggcgtcggtttctttaagaggacagtggtattt
gttcctggggcactacctggggaagaaattacagctgaagtcacaaaggttttttcaaat
cgtgctgaagcaaaaataaaaaggcttcgaaaaaaatcgaatgacagaactactccgcca
tgtccggtatatgaagaatgtggaggatgtcagctccaacatttaagctatgaggcacaa
cttcgtgaaaagcgggatattgtgattcagtcatttgaacggcatgcaaaattgggtgaa
aaggatataacgataaagcccgtaattggaatgaaagatccatggaactatcgaaataaa
agtcagcttcaggtaagaaagcaaaagggaaaagtcattgcaggattatatggagcaggg
tcacatgagcttgttgaactgacaaactgtttagtacaacacccggaaacaaatcgagta
actcgtcaagttgtgaagatactcgaggatttaaatattacgatatatcatgaaaagaag
aggaaggggctagttcgtacaattgtaacgagagttggatttgagacgggacaaattcaa
ttagtgcttgtcacttcagaagagaacattccgcggaaagaattacttattaaagaagtg
aagaaaaggcttcctgaagtgaagtcggttattcaaaatgtaaatgggcagagaacatct
ttaatattcggtgataaaaccttcgtattagatggggaagaagtaatagaggaatcatta
ggagatttaaatttcgaattatctgctcgtgcctttttccagctaaatcccacgcaaact
attcacctctatgatgaagtgaaaaaagctgctgcgcttactggtaaagaaaacattata
gatgcatattgtggagtaggtacgattggattatggcttgccgataatgcgcgagaagtc
agagggatggatgtcattaaagaatcgattgatgatgcaagaaagaatgctaaaagtcac
ggttatcaggagaagatgacttacgatgtaggtaaagcagaagaggtcgttcctaagtgg
ataaaagaaggattcaaaccaaacgtgattgtggtagatccaccaagaactggctgtgat
gagacgttattagttacgatggtaaaagcaaagccagatcgaattgtttatgtatcctgt
aatccttcaacgcttgcaaaggattcttcctatttaatgaaaaagggatatgagcttcag
catttacagccagtcgatatgtttccacaaacgtctcatatcgaggtagtgtctgttttt
aaaagaaacacaggaaataagaaatag
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