Guptibacillus hwajinpoensis: LC071_19850
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Entry
LC071_19850 CDS
T09276
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
phj
Guptibacillus hwajinpoensis
Pathway
phj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LC071_19850 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phj03019
]
LC071_19850 (recQ)
03400 DNA repair and recombination proteins [BR:
phj03400
]
LC071_19850 (recQ)
Enzymes [BR:
phj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LC071_19850 (recQ)
Messenger RNA biogenesis [BR:
phj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LC071_19850 (recQ)
DNA repair and recombination proteins [BR:
phj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LC071_19850 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
WLR59361
LinkDB
All DBs
Position
complement(3844334..3846424)
Genome browser
AA seq
696 aa
AA seq
DB search
MLQQAREQLKHHFGYDQFRGGQEQIISSVLSNHNTLGIMPTGGGKSICYQIPALLSDGLT
IVISPLISLMKDQVDALAGYGIEAAYINSSLTETEIRDHMAEAESGEIKLLYVAPERLEA
PTFQRLLKRTKISLIAVDEAHCISQWGHDFRPSYMKISQMLHHFEVQPPVVALTATATPE
VIQDIQRILNITPEQTFISGFARENLHFSVIKGEKKKSFIDKYLSQNASESGIIYTATRK
EADQLYASLQKQGIKVGKYHAGMTEKQRKTAQEEFLFDNISVMVATNAFGMGIDKSNVRF
VIHHNLPKNMESYYQEAGRAGRDGEESDCFVLFSPGDIHVQKFLIDQNQHEPERKSADLA
KLKAMVDYCHTEKCLQGTILHYFGDERPGYKCGKCSNCIDDRETVDITREAQMIFSTIKR
VNERFGKTIIAQVLKGSKSKRLNELRLDSVSTFGLLKHLTQQDIVDMIDFLTAEQYILLT
DSKYPTLVLQEKTLPVLKGQESIYKKVARKPVAIEEDDQLFTQLRTLRKQIADRDNVPPY
VVFADSTLREMSAKTPATRKEMLEIKGVGDMKFDKYGEVFLELLSSAKSAKPTSSEDASH
KASLKLFEEGKDIPNISAARSLSPTTVESHLLKAMEEGLLEDTSRLIDQEIEHKILETAA
DVGFDKLKPIKEALPESFTYFQIKVALTKHRQTSNS
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgctccaacaagcacgagaacaacttaaacatcattttgggtatgatcaatttcgaggt
ggacaggaacagatcatttcaagtgttctatctaaccataatacgcttggcattatgcct
actggtggaggaaaatcaatttgttaccaaattcctgctcttctatcggatggattaacg
atcgtcatttcaccgcttatttcactaatgaaagatcaggttgatgcgcttgccggatac
ggtatagaagctgcctatattaatagctcacttacagagactgaaattagagaccatatg
gccgaagctgaaagtggagaaataaagttactatacgtagcaccagaacgcttagaagca
ccaacgtttcagcggttgcttaagcggactaagatttcgcttattgccgtagatgaagcc
cattgtatttcccaatgggggcatgatttcagacctagttatatgaagattagccagatg
cttcatcactttgaagtgcagcctcccgtcgttgctttaaccgctacggcaacacctgaa
gttattcaggatatccagcgaatcttaaacataaccccagagcaaacctttatctccgga
tttgccagggaaaacttgcacttctctgttattaaaggagagaagaaaaaatcatttatc
gataaataccttagccaaaacgcttctgaatccggtattatctataccgccactagaaag
gaagcagatcaactttacgcttccttacaaaaacagggcattaaagttggcaagtaccac
gctggtatgacagaaaagcagcgtaaaacagcgcaagaggaatttttatttgataacatt
tcagtgatggtcgcaactaatgcttttgggatggggattgataaatcaaatgttcggttc
gtgattcatcataatcttccaaagaatatggaatcttactaccaggaagcgggacgagct
ggccgtgatggagaagaaagtgattgcttcgttctcttttctcctggtgatattcacgtg
cagaagtttctcattgaccagaaccaacatgaacctgaacgtaaatccgctgacctcgcc
aaattaaaagcgatggttgattattgtcatactgaaaaatgcctccaaggaaccattctt
cattactttggagatgagcgtccgggctataaatgtggtaaatgcagcaattgtattgat
gacagagaaaccgttgacattactcgtgaagcccaaatgattttctcgacgattaaacga
gtgaatgagcgatttgggaaaacgatcattgcacaggtactgaaaggatcgaaatcaaag
cgtttgaacgaactacgactcgacagcgtttcaacctttggtttattaaaacatctcacg
cagcaggatattgtggatatgattgattttctaacagccgagcaatatattctattaact
gatagtaagtaccccaccctcgttctacaggagaaaacgttacctgtgttaaaaggacaa
gaaagcatatataagaaagtagctcgtaaaccagtagcgattgaagaggatgatcaactc
tttacacagctgcgaacgctaaggaagcaaattgccgatcgagacaacgtgccaccttac
gttgtgtttgccgatagtacattgcgagaaatgagcgcaaaaacacctgccacacgtaaa
gaaatgcttgagatcaagggcgtcggggatatgaagtttgataaatacggcgaagtcttt
ctagagctactctcatcggcgaaatcagcgaaaccaacgtcttcagaggatgcgagtcat
aaagcctcattaaagttatttgaggaaggtaaagacattccaaacatctcagcagctcgt
tcattaagtccaaccaccgtcgaaagtcatctactaaaggcaatggaagaaggtttactt
gaagatacgagtcgtctcatcgatcaggaaatagagcataagattcttgagacagcggca
gatgtagggtttgataaactgaagccaattaaagaagcactacccgaatcgtttacttac
tttcaaattaaggtcgctttaacaaaacatcgtcaaacttcgaatagttaa
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