Guptibacillus hwajinpoensis: LC071_20360
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Entry
LC071_20360 CDS
T09276
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
phj
Guptibacillus hwajinpoensis
Brite
KEGG Orthology (KO) [BR:
phj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phj03400
]
LC071_20360 (addA)
Enzymes [BR:
phj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LC071_20360 (addA)
DNA repair and recombination proteins [BR:
phj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LC071_20360 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
Viral_helicase1
DEAD
ResIII
AAA_11
AAA_30
AAA_22
AAA_16
GalP_UDP_tr_C
Motif
Other DBs
NCBI-ProteinID:
WLR59454
LinkDB
All DBs
Position
3934241..3937963
Genome browser
AA seq
1240 aa
AA seq
DB search
MTIMNKPEGSKWTDEQWEAIAARDQDVLVAAAAGSGKTAVLVERIIRRLADENDPAEVDR
ILVVTFTNAAAAEMRHRIGEALEEKLKEDPSSLYLRRQLSMLNRASISTLHSFCMEVLRR
YYYEIDLDPAFRVADQTEAALLREEAMEELFEEHYSKKENEAFYDLVDRYSSDRSDVDLQ
LLVERLYHFSSSHPWPEQWLQESVAVYEEASEKAFDELVWVEEIKKDVVLQLEGMREMQE
KAISLSNAPGGPEPYLEMLEMEREMTERLLSASAQTWQELKHEFEQITFGRLKPCKGDQY
DPEMIDTVKGLRDRVKKTIQSLKDELFQRNPEEYVEDIVQLAPVLGTLSSLVNEFRHKYT
ELKKEKGLVDYSDLEHYCLSILLDDRSTPENPVPSSAAREYQTQFAEVLIDEYQDTNSVQ
ETILNAISRTSDSGGNRFMVGDVKQSIYRFRLAEPGLFLSKYKTFGRSSDEPSKRIDLAR
NFRSREEVLNSTNFIFKQIMDERVGEIEYDEAAELIPGAEYPNSETVVPEVHIIDKSAQK
EEDEEETEKVQLEARLIASNIKDMMGKSESERTKVYDRKEDRMRPIQYRDMVILMRATAS
WAPVIMEELKQAGIPSYSDLATGYFEATEVAIMMSLLNVIDNPYQDIPLASVLRSPIIGL
TEEELSLIRINEKNSSYYLALRSYCETESNKLSETLSKFITNLNRWREAARQSSLSELIW
QLYRETNYYEFVGGMPAGLQRQANLRALYDRARQYEATSFRGLFRFLRFIDRMKERGSDL
GTARALGEQEDVVRVMTIHKSKGLEFPVVFIAGIAKQFNMRDMANQMLMHKEFGLATKFI
DPIQRISYPTLPYFTLQKRMKLELLAEEMRVLYVALTRAKEKLILVGTVNDWEKERLSWA
GAAGDEWLLSDYERSKGKTYLSWIGPAIMRHKDLASITEGIANFSKHDEVFQHPARWSLT
LHNASSFAEIEAEDVHKHREYEMLLQKKEPIPEVSSFKDEVTHRLDWTYPHRAASETRSK
QSVTEVKRQREIFQDERSDDKLVKGFSQSLKERPRFLQSKQLTPAERGTAMHIVMQHLDL
QKWHDRDDINELVAKLEQKELLTNEQGRAIDVEQIHQLMNSELGQKMRNAAEIYKEVPFS
LGVDSTWIYPEFEGDQETVVLQGVIDCILRDQNGELVLVDYKTDVIANRFTSDEQAMETM
KWRYTTQLQLYEKAINEIWKVPCKEKILFFFDGGRSLIID
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgacgataatgaataaacccgaaggctcgaaatggacagacgaacaatgggaagctatt
gctgctcgtgatcaagacgttctcgtagcagctgcagctgggtcgggaaaaacggctgtt
ctagttgaacgaattattaggcgtcttgctgatgagaatgatcctgctgaagttgatcga
attcttgtcgtaacgtttaccaatgctgcagcggctgaaatgagacatcgaatcggggag
gctcttgaagaaaagttaaaagaagacccatcttccctttatttaagaagacagctttcg
atgttgaatcgcgcttccatttcaacgcttcattctttttgtatggaagtacttcgacgc
tattattacgaaattgatcttgaccctgcatttagagtagcagatcaaaccgaagcggca
ttgcttcgtgaggaagcaatggaagaacttttcgaggagcattatagcaagaaagagaac
gaggctttttatgaccttgttgatcggtatagtagtgatcgtagtgatgtggatcttcag
cttcttgtggaaagactctatcatttctcttctagtcacccatggccagagcagtggttg
caagagagtgttgccgtatatgaagaagcgagtgaaaaagcgtttgatgaattagtctgg
gtagaggaaataaaaaaagatgtcgttcttcagcttgaaggtatgcgtgaaatgcaagag
aaggctatctctctttctaatgcacctggtggtccagagccataccttgagatgttagaa
atggaacgtgaaatgacggaaaggcttctttcagcttccgctcaaacgtggcaggagctc
aaacatgagtttgaacaaataacgtttggtcgcttaaagccttgcaaaggggatcaatat
gatcctgaaatgattgatacagtaaaaggccttcgtgatcgtgtcaaaaagaccattcaa
agcttaaaagatgagctattccaacgaaaccctgaggaatatgtagaagacatcgttcag
cttgctcctgtactaggaacgttatcttctcttgtaaatgaatttagacacaagtatacg
gagttaaaaaaagaaaaagggcttgtagattacagtgaccttgaacattattgtctttct
attttattagatgatcgttctactcccgagaacccagtcccatcgagtgccgctcgtgaa
tatcaaacacaatttgctgaagtactgatcgatgaataccaggatacgaactctgttcag
gaaacaatcctaaatgccattagcaggacttctgactcaggagggaaccgcttcatggta
ggggacgtgaagcaaagtatttaccgttttagactagcagaacctggattgttcctctct
aagtataagacgtttggtcgatcgtctgacgagccatcgaaacgaattgatcttgcgcgc
aatttccgtagtcgagaagaagtgttgaatagtacgaattttatcttcaaacaaattatg
gacgagcgtgttggagagatagagtacgatgaagcagctgagctcattcctggcgcagaa
taccctaattctgaaacggttgttccggaagttcatatcattgataagagcgcccagaaa
gaggaagacgaagaagaaactgaaaaggttcagcttgaggctcggcttattgcctctaat
attaaagatatgatgggtaagagtgaaagcgaacggacaaaagtatacgaccggaaagaa
gatcgtatgagaccaatccagtatagggatatggtgattttaatgcgtgcaacagctagc
tgggcacctgtgatcatggaagaattaaagcaagctggcatcccatcttattctgatctt
gcaacaggctattttgaagcaacagaagtcgcgattatgatgagtcttcttaatgttatt
gataatccatatcaggatattccgcttgcctccgtgctgcgttcacccattatcgggtta
acagaggaagagctttcccttattcgtatcaatgagaaaaattcaagttattatcttgcc
ttacgatcttattgtgagacagagtcgaacaagctatcggagacgttatcgaagttcatc
acaaacttgaacaggtggcgagaagcggcaaggcagtcttctttaagtgagttaatttgg
cagctttatcgagaaacgaactattatgaatttgttggtggaatgcctgccggcttgcag
cgacaggcgaatttacgagcgctgtatgatcgagcaagacaatacgaagcgacatcgttt
cgtggcttatttcgtttccttcgctttattgacagaatgaaagagcgtgggagtgatctt
ggaactgctcgtgctcttggagaacaagaggacgttgtacgagtgatgaccattcacaaa
agtaaaggacttgaatttcctgtcgtctttatagcaggaatcgccaagcaatttaatatg
agagatatggcgaatcaaatgctgatgcataaagaatttggtcttgccacaaaattcatt
gatccaattcagcgtataagctatccgacattgccttactttacactgcaaaagcggatg
aagcttgagctacttgctgaagaaatgcgagttctttatgttgccttaacgagagcgaaa
gaaaaattaattttagttggaacggtaaatgattgggagaaagaacgattgtcgtgggca
ggagcagctggagatgagtggctgctatcggattacgaacgatcgaaaggaaagacctat
ctgagctggattggccccgctattatgcggcataaagatcttgcttctataactgaagga
atagcgaatttttcaaaacatgatgaggtatttcaacatccggcacggtggtcactcact
cttcataacgcttcgtccttcgctgagattgaagcagaagatgttcataaacatcgggaa
tatgaaatgttactacagaagaaagagcctattcctgaagtgagctcctttaaagatgag
gtgactcatcgtcttgattggacttatcctcatcgagcagcgtctgaaacaaggtcgaaa
cagtcggtaacagaagtaaagcgccaacgtgagatctttcaagatgaacgaagtgatgac
aagctagtcaaaggatttagtcaatcattgaaagagcgacctcgctttcttcaaagtaag
cagttaacgcctgctgagcgaggaacggcaatgcacattgtcatgcagcaccttgatttg
caaaagtggcatgatcgtgatgacattaacgagttagttgccaaacttgagcaaaaggaa
ttgttaacaaatgaacagggaagagccattgatgtcgaacaaattcatcaattaatgaat
tcagaacttggtcagaaaatgagaaatgcagctgaaatatataaagaggttcctttcagc
ctaggagtagattcaacgtggatctatcctgaatttgaaggagaccaagaaaccgtggtt
cttcagggtgtgattgattgtattcttcgcgatcaaaacggagaattggtgcttgtcgat
tacaaaacagacgtgattgcgaatcgttttacttctgatgaacaagcaatggagacaatg
aaatggcgctatacaacacagctacaattatatgaaaaagccattaatgagatctggaag
gtgccttgtaaggagaaaatattattcttctttgacgggggtcgatctctcataatcgat
taa
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