Pseudalkalibacillus hwajinpoensis: LC071_20370
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Entry
LC071_20370 CDS
T09276
Name
(GenBank) SbcC/MukB-like Walker B domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
phj
Pseudalkalibacillus hwajinpoensis
Brite
KEGG Orthology (KO) [BR:
phj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phj03400
]
LC071_20370
DNA repair and recombination proteins [BR:
phj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LC071_20370
Archaeal homologous recombinant proteins
LC071_20370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
ABC_tran
AAA_16
YwqJ-deaminase
DNA_pol_B_thumb
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
WLR59455
LinkDB
All DBs
Position
3939218..3942568
Genome browser
AA seq
1116 aa
AA seq
DB search
MRPIHLSVSGLHSFREKQEIDFESLCQGGIFGIFGPTGSGKSSLLDAMTLALYGKVERAT
NNTQGIMNHAEDTLYVSFTFALGNKLRYRVERSYKRSGDVSIRSANSRLIELGEENTVLA
DKDRDVSQQIQEILGLTIDDFTRAVVLPQGKFAEFLSLKGTERRQMLQRLFQLEKYGDQF
NRRLRARVDEKKYQLNEITAEQTGLGEASKESLKEAKEAFLEAEKAAQKAKDDLIAVEKQ
KENVTEIWNLQNQLDELRSKKKAIAEQRAEIETLEIKINEANAAGQIKPYLDAVEATEKE
VQEAKNRYEETKRQLEEATKLYQARKNEHESKQRDRQEQEPLLLKKLNELERGLELEKEI
SQLKTKRAGVENQSILLEKESKVKAEETKKAQEDLKKARTLQADLNKDLTSRQVAPEERK
RILRAQSLKQEFQSLQKQLDETRGEEEKQVNAQKQLQPLYDDTMQNLKVLKESYSGYYNL
VLSTYHAISSHKLTLENHIRNVQDEIDQTSQSLEQNRTHVIAIRLARELEEGQACPVCGA
KEHVQLAEGNDNTPDLKEDLKEKEQRRERLKDQLQNAKQLQYQLEQTSDLMTDQDEQLVK
AQDISDVDRNLTETAVITEIKSLAQDVREIEEKVKYVGKSLQEQQSKATEYAYRLEQVQK
DLEVRTEKRINLSKETEEITKTIQEELSLSVHEIEAEMKKIEEMDKEATIIRERLEKSVP
YIEKKEQHLLELQEKVQQHTVRRAELTSSLQQLTEQINKMVADYNGIVGNTTAEEGYKAT
NEQLHVLRKEEKTAYERLQLAEESYQQNERRSAADQNYNDDAQLRLKKSLETYQAVEKDS
IFENRMQVRDAEVDKEQKQKWEEQVQAYRKERDQTEHSMVELEKKLAGRAITEGEYHETI
NRVESAKANREETLSHYAACRHRVEDITKRHERYKELEGDRQSFSEELEKLNKLQTVFRG
NSFVEFIASEQLEQVSFDASQKLGDLTSQRYAIEVDSGGGFLIRDDANGGVKRPVSTLSG
GETFLTSLALALALSGQIQLRGAHPLQFFFLDEGFGTLDESLLDTVITSLEKLQNESLSV
GVISHVPELRARLPRKVIVTPSEPSGRGSRIEMETL
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgatacacctgtccgtttcaggactacatagttttcgagagaaacaagaaatt
gattttgaatcgctgtgtcagggaggaatctttgggatatttggtcctactggcagtggg
aaatcgtctttgcttgatgcgatgactcttgccctttatgggaaagttgaacgagcaacg
aataatacccagggcattatgaatcatgcagaagacacgttgtatgtttcgtttacattc
gccctaggaaacaaattgcgctatcgggtggagcgaagttataaacgttctggagatgtt
tccattcgttcggccaattcaagattaatagaacttggtgaagaaaatacggttttggcg
gataaagaccgtgatgtttcacagcaaattcaagaaattctagggctaacgattgatgac
ttcactcgtgctgttgtattgccacagggtaaatttgcagaattcctttctttaaaaggc
actgagagaagacaaatgttacaacgtttgttccaacttgagaaatacggagatcaattt
aatcgtcgattaagagcaagagtggatgagaaaaagtaccagctgaacgaaataacggct
gagcaaacgggactaggtgaagcttctaaagaatctcttaaagaggcaaaggaagctttc
cttgaggctgaaaaagctgctcagaaagcaaaggacgatcttattgcagttgagaaacaa
aaagaaaatgtaacagagatttggaatcttcaaaaccagcttgatgaacttcgcagtaag
aaaaaggcgatagctgaacaaagagctgaaatcgaaacgcttgaaataaagatcaatgaa
gcaaatgcagcggggcaaataaagccttatttagatgctgttgaagcaacagaaaaagaa
gtacaagaagcaaagaatcgttatgaagaaacaaagcgtcaactagaagaagctacaaag
ctgtatcaagcaagaaagaatgagcatgaaagcaagcaacgagatcggcaagagcaggag
cctctcctattaaaaaaactgaacgaacttgagcgtgggttggagcttgaaaaagaaata
tctcaactgaaaacaaagcgtgctggtgtcgaaaatcaatcaattttgctagaaaaagag
tcaaaggtaaaagcggaagagacgaaaaaagcacaagaggatttaaagaaagcgcgcaca
cttcaagccgaccttaataaagatttgacgagtcggcaggtcgcccctgaagaacgtaag
cgaattctaagagctcagagtttgaagcaggagttccaatctctacaaaagcagctagat
gaaacgcgtggtgaagaagaaaaacaagtgaatgctcaaaagcaacttcagcctctttat
gatgatacgatgcaaaacttgaaggtgttaaaggagagttattcaggttattataacttg
gttctttcaacatatcatgccatatcatctcataagcttacgcttgagaatcacatccgt
aacgttcaggatgaaatcgatcaaacgagtcaaagtcttgaacaaaatcgcacacatgtc
attgcaatacgtcttgcgagagaactagaagaagggcaggcatgccctgtttgcggtgcg
aaagaacacgttcagcttgcagaaggtaatgataacacacctgatttgaaggaagatcta
aaggaaaaagaacaaaggcgtgagcggttaaaagatcaacttcaaaatgctaagcagctc
caatatcagctagagcaaacgtctgacctgatgacagatcaggatgagcaactagttaag
gcgcaagatataagcgatgtcgatcgtaaccttacagaaactgctgttataacagaaata
aaatcgctagctcaggatgttcgagaaatagaagaaaaagttaaatacgttggaaagagt
cttcaggagcagcagtcaaaagcgaccgaatatgcttatcgtctagaacaagttcagaaa
gatctagaagttagaacagaaaagcggattaatttaagtaaagaaacagaagaaataacg
aaaaccattcaagaggaattgtctctttctgttcatgagattgaagcagaaatgaaaaaa
attgaagagatggataaagaagcaaccatcataagagagcgtctcgaaaaaagcgttcct
tatattgagaaaaaagaacagcaccttttagagcttcaagaaaaggtgcaacagcatact
gtgcgtagagctgaattaacaagctcattacaacagcttacagaacaaatcaataagatg
gtagctgattacaatggcatcgtaggtaacacaactgcagaagaagggtataaagcaacg
aatgagcaattacatgtccttcgaaaagaagaaaaaacggcatatgagcgattgcagcta
gcggaggaaagttatcagcaaaatgaacgacgttccgctgccgatcaaaattacaatgac
gatgctcagctacgtttgaaaaaatcacttgaaacatatcaagcagttgaaaaagactct
atttttgagaaccgtatgcaggttagagatgcagaagtggacaaagaacagaaacagaaa
tgggaagagcaagtacaagcctatcgaaaagaaagagatcaaacggagcattcgatggtg
gagcttgagaagaagcttgcagggagagctatcactgaaggagaatatcatgaaacgatc
aatagagtagaaagtgcaaaagctaatcgagaggaaaccttatcacattatgcggcatgc
cgacatcgtgtagaagatataacaaaaaggcatgaacgctataaggagcttgaaggggac
cgtcagtcttttagtgaggagcttgagaagcttaataagcttcaaaccgttttccgggga
aatagttttgtggaatttatcgcttctgaacagcttgagcaagttagttttgacgcttca
cagaagttaggcgatcttacctcgcaacgatacgccattgaagtagactcaggaggcgga
tttttaattcgtgacgatgccaacggaggagtaaagcgaccagtctccacattatcagga
ggagaaaccttccttacatcgcttgcgcttgcccttgcactgtcaggacaaattcaattg
agaggtgctcatcctctgcagtttttcttccttgatgaaggatttggtactctagacgaa
tcacttctagataccgttattacatcgcttgaaaaactacagaatgagagcttatctgtc
ggtgtcattagtcacgtaccagagcttcgcgcaagactgcctcgaaaagtcattgtgacc
ccatcagaaccatcggggcgtgggagtcgtattgaaatggagacactttag
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