Paenibacillus hunanensis: SK066_02270
Help
Entry
SK066_02270 CDS
T09633
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
phk
Paenibacillus hunanensis
Pathway
phk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SK066_02270
09124 Replication and repair
03420 Nucleotide excision repair
SK066_02270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phk03021
]
SK066_02270
03036 Chromosome and associated proteins [BR:
phk03036
]
SK066_02270
03400 DNA repair and recombination proteins [BR:
phk03400
]
SK066_02270
Enzymes [BR:
phk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SK066_02270
Transcription machinery [BR:
phk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SK066_02270
Chromosome and associated proteins [BR:
phk03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SK066_02270
DNA repair and recombination proteins [BR:
phk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SK066_02270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
Motif
Other DBs
NCBI-ProteinID:
WPP41810
LinkDB
All DBs
Position
576906..579188
Genome browser
AA seq
760 aa
AA seq
DB search
MTTIIDIPVRPLVEYVYRSGSIESGFRVAQTMQEGTRIHKQVQEGYGEEGEKEVHLRIEI
PLRDLLFRIEGRCDGLWIDESGLLTVDEIKSTSITAEDIGDGREVHWAQAQMYGHILAEQ
RELEQVRIQLTYVHKSSGKETKLERIRTRQELQNFAMDTLEQYAPYAEMLAEHRRRRNAS
IEGLPFPFAGYRSGQRQFAGAVYKTIGEQVNLFAEAPTGTGKTISTLFPAIKSIGNERAE
RLMYITAKTVTRANAEDALQRMQQNGLHLHGVTITAKDKVCFCTAEGGSGREDCAYTNGY
YDRINEAILDMLTNETLMNRDVIERYAQKHTVCPFELSLDASYASDAVICDYNYVFDPRV
SLKRMTDDQRKSTVLLVDEAHNLVDRGRNMFSAQLNKAAFLDLKRDYQQRSEPLSKIAGA
INAYFIRLRKQMDGEQMISRSEAPEDIFKLLEEFTIRAETTLLEQGDSGETEQLLETYFA
AQAFLRIGRLYDMESHITYVEQDGSEVILRMFCIDPSLQLRQTAKGYRSVIHFSATLSPI
RYYRDMLGAAEDDYNISIPSPFSKEQLEVRIVPLSTRYRDRERTRQELAELLAQLVNERQ
GNYLAFFPSYQYMRDVLEAFEALEPDTDILVQQSSMAEEERDRFLEAFQPYNERTLTGFA
VMGGIFSEGVDLAGDRLTGVIIVGVGLPQIGPERELIREHFSRGGHSGYNYAYVYPGMNK
VLQAGGRLIRTEQDHGLLMLVDDRFLQNPYAQLLPPEWKD
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccattattgatattccggtacgtccactggtggaatatgtgtatcggagcggc
agtattgaatcaggctttcgcgtagcacagacgatgcaagaaggcacacgtattcataag
caggtgcaggaaggctacggagaagaaggcgagaaggaggttcatctacggatcgaaatt
cctttacgtgatctgctatttcgcatcgaaggacgctgcgatggattatggatagacgag
tccggcttgctcacggtcgatgagatcaaatccacttcgatcacagcagaggatatcgga
gacgggcgtgaggtgcattgggcgcaggcgcaaatgtacgggcatattttggctgaacag
cgtgagctggagcaggtacgtattcagctcacctatgtacacaaaagcagtggcaaagaa
accaagctggagcgcattcgcactcgtcaggagctacaaaactttgcaatggatacattg
gagcaatatgcgccctatgcggagatgctagccgagcatcgccggcgacgtaatgctagc
atcgagggcttgccgtttccatttgccgggtatcgttcaggtcagcggcaatttgctgga
gcggtgtataagacgattggcgagcaggtgaatctgttcgccgaagcacctaccggaaca
ggcaagacgatctcgacgttatttcccgcgattaaaagtatcggcaatgaacgtgcggag
cgactgatgtacattaccgccaaaacggtcactcgcgctaacgccgaggatgcactccag
cgcatgcagcaaaatggtctgcatctgcatggtgtgacgattacggcgaaggataaggtc
tgcttttgcaccgccgagggcggaagtggacgggaggattgcgcgtacacgaatggttat
tatgaccgtattaatgaagcgattctcgatatgctcacgaacgaaacactcatgaaccgc
gatgtgatcgagcgttatgcgcaaaagcataccgtctgtcccttcgagctgtcactggat
gcctcgtatgcgtcggatgcggtcatttgcgactataactatgtgtttgatccgcgtgta
tcgctcaagcgtatgacggatgaccagcgcaaaagtacggtgctattagtcgatgaggca
cataatctggtcgatcgtggacggaatatgttttccgctcagctgaataaggctgcattt
ctcgatctaaaacgagactaccagcagcgttcagagccattgtccaaaatcgctggcgcg
atcaatgcctattttatccgcctgcgtaagcaaatggatggagagcagatgatcagccgc
agtgaagcaccggaggatattttcaagctactggaagaattcacgattcgtgcggagacg
accttgctagagcagggagatagcggtgagaccgagcagttgctggagacgtattttgca
gcacaggcttttttacgcattggacgattgtacgatatggagagccatattacgtatgta
gagcaggacggcagcgaggtcatacttcgtatgttctgtatcgatccatcgctacagctt
cgtcagacggccaagggatatcgctcggtcattcatttctcagcgaccttatcgcctatt
cggtattaccgcgatatgctgggcgcggcagaggatgattacaatatttcgattccatcg
cccttttctaaggaacagctcgaagtacgcatcgtgcctctgtccacacgctatcgcgac
cgggaacgtactcggcaggagctggcagagctgctcgcccagctggtcaatgagcgacag
ggcaattatcttgccttcttcccgtcctatcagtatatgcgtgatgtgttggaagcattt
gaagcgctggagccggatacagatatattagtacagcaatccagtatggcagaggaagag
cgagatcgattcctcgaagccttccaaccttacaacgagcgcaccttaaccggattcgct
gtcatgggcggcatttttagcgagggtgtcgatctagcaggcgaccgcctgacgggcgtg
atcatcgtcggtgtcggcttgccccagattggccctgaacgtgagctgattcgtgagcat
tttagccgaggaggacatagcggttataactatgcctacgtctacccaggtatgaataag
gtgctgcaagcaggtggacgattgattcgtaccgagcaggatcacggtctgctcatgctg
gtcgatgatcgctttttacaaaatccatatgcgcagctattgccgccggagtggaaggat
taa
DBGET
integrated database retrieval system
