Paenibacillus hunanensis: SK066_03640
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Entry
SK066_03640 CDS
T09633
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
phk
Paenibacillus hunanensis
Pathway
phk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SK066_03640 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phk03400
]
SK066_03640 (uvrA)
DNA repair and recombination proteins [BR:
phk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SK066_03640 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SK066_03640 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_21
nSTAND1
RsgA_GTPase
AAA_22
nSTAND3
AAA_25
DnaJ_CXXCXGXG
NACHT
BCA_ABC_TP_C
AAA_24
cobW
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
WPP42071
LinkDB
All DBs
Position
915861..918722
Genome browser
AA seq
953 aa
AA seq
DB search
MLNKFIEIKGARAHNLKNIDIQIPRDSFVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGHP
HCPDHGVEITSQTVEQMVDRIMEYPERTRLQILAPIISGRKGEHKSVFAEISKQGFVRVR
VDGELRDLSEDIQLEKNKKHTIEVVVDRIVIKEDVTARLADSIEMALKMSGGQLLVDIIG
QEELRFSSNFACPICGFSIEELSPRMFSFNSPFGACPECDGLGIRMVVDPDLLIPDKSKT
IEEGAFQAWSGGLSNYYPQFLKSVCEHYKIPMDIPVSELTADQMNLILNGSDGQKIRFRY
ESDFGRTKEAQVVFEGIIPNLERRYKDTSSDSMREYIEGYMSAKPCPVCKGKRLKREILA
VSVDGKNISDTTELPIHDALHFFQNIQLSEKEFSIARLILKEIVSRLGFLVNVGLDYLTM
ARAAGTLSGGEAQRIRLATQIGSSLTGVLYILDEPSIGLHQRDNDRLIKTLEHMRDLGNT
LIVVEHDEDTMMAADHIIDIGPGAGIHGGQVIAAGTPAEVMDHPDSLTGQYLSGRKFIPV
PLERRQPGERWLEIRGAKENNLKNVNVKIPIGLFTAVTGVSGSGKSTLVNEILYKTLARD
LNKARVIPGQYREIRGLEHIDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNEAK
VRGYKKGRFSFNIKGGRCEACRGDGIIKIEMHFLPDVYVPCEICKGQRYNRETLEVKYKN
RTIADVLDMTIEDAVEFFQNMPRIHRKLQTLLDVGLGYVKLGQPATTLSGGEAQRVKLAS
ELHRRSTGKTMYILDEPTTGLHVDDIARLLQVLQRLVDSGESVLVIEHNLDVIKTADYLI
DLGPEGGSGGGTILASGSPEHIAGVENSYTGRYLKPVLERDTVRSRELESSQV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaacaaatttattgaaatcaagggtgcccgcgcgcacaatcttaaaaatatcgat
attcagattccgcgcgacagctttgtcgtattaaccggtttgagcggatcgggcaagtcc
tcgctcgcgtttgacacgatctatgcggaagggcagcgccgttacgtagaatcgctgtct
gcctacgcacggcagttcctcggtcaaatggacaagccggatgtggattcgattgatgga
ctatcgccagcgatttcaattgaccagaaaacaacaagccgtaacccgcgttctactgtc
ggtacggtaacggaaatttatgattacctgcgtctcctatttgcacgtgtaggacatcca
cattgtccggatcatggcgttgaaattacgtctcagaccgtagagcagatggtcgatcgg
attatggaatatccagagcgtacccgtctacagattcttgcgcctatcatttccggtcgt
aaaggcgagcacaaaagtgtatttgccgagatttccaagcagggctttgtacgggttcgc
gtcgatggtgaactgcgcgatctgtctgaggatattcagctggagaaaaataaaaagcat
acgatcgaggttgtcgttgaccggatcgtgatcaaggaagatgttacagcacgtcttgcc
gattcgattgagatggcactgaagatgtcgggtggtcaattgctggtcgatattatcggt
caggaggagctacgctttagctcgaattttgcctgcccgatctgtggattcagcattgaa
gagctgtcgccacgtatgttctcatttaacagtccattcggtgcttgtccggaatgtgat
ggtctcgggattcgaatggtagttgacccggatctgctcattcctgacaaaagtaaaacg
attgaagaaggtgcttttcaggcgtggagcggtggtctatcgaattactatccacaattc
ctcaaatccgtctgcgagcattataaaattccgatggatattcctgtatccgaattgaca
gccgatcagatgaatttgatcctgaatggctctgatggacaaaagattcgtttccgctat
gaaagtgacttcggacgaactaaagaagctcaggttgtattcgaaggaattattcctaac
ctggagcgtcgttacaaggatacgtcatcagacagtatgcgcgaatatatcgaaggctat
atgagtgcgaagccatgcccggtatgtaaaggcaagcgtctgaaacgcgaaattctggca
gtaagcgtcgatggtaaaaatatttccgatacgacagagctgccgattcatgatgcgctt
catttcttccaaaatatccaattgagcgaaaaggaattcagcattgctcgtctgatcctc
aaagagatcgtcagtcgtctcggcttccttgtcaatgtcggtttggattatctaacgatg
gcgcgtgcagcaggtacattgtccggtggtgaggcacagcgtattcgtctggcaacacag
atcggttccagtctgacaggcgtattgtacattttggatgaaccgagtatcggtctgcat
cagcgtgacaatgatcgtctgatcaagacgctggagcatatgcgtgatctgggcaataca
ttgatcgtcgtagagcatgacgaggatacgatgatggctgcggatcatattatcgatatt
ggcccaggtgcggggatccatggtggacaggtcattgcagccggtacaccagctgaagtg
atggatcatccggattcattgaccggacaatatttgagcggacgtaagttcattccggta
ccgctggagcgtcgtcaacctggcgagcgctggctcgaaatacgcggcgcgaaggaaaat
aacctcaaaaacgtgaatgtgaagattccaatcggtctattcacagctgtaacaggtgta
tccggctccggtaagtcgacgctggtgaatgaaattttatacaaaacgctggctcgtgat
ctgaataaagcacgcgtgattccagggcaataccgtgaaattcgtggtctggagcatatc
gacaaggtgatcgatatcgaccaatcgcccatcgggcgtacaccacgttccaacccggca
acctataccggtgtattcgatgatatccgtgatttgttcgctcagacgaatgaagccaaa
gtacgcggctacaaaaaaggtcgcttcagcttcaacatcaagggtggacgctgtgaagcc
tgccgtggtgacggtattatcaagatcgagatgcacttcttaccggacgtgtatgtacct
tgcgaaatctgtaaaggacaacgctataaccgtgagacactggaagtaaaatataaaaat
cgtacgatcgctgatgtactcgatatgacgattgaggatgcagttgaatttttccaaaac
atgcctcgtattcatcgcaagctgcaaacgttgcttgatgtaggtcttggctatgtgaag
cttggtcaaccggcaacaacactgtccgggggggaggcgcagcgtgtgaagctggcttct
gaactgcatcgtcgcagtacagggaagacgatgtacattttggatgagccaacaactggc
ttgcatgtggatgatattgcgcgtctgctacaagtgttgcagcgtctggttgattccggt
gaatcggttctcgtcatcgagcacaatctcgatgtgatcaaaacagccgactatctgatc
gaccttgggccagaaggcggtagcggcggtggaacgattctagcatccggctcaccagag
catatcgcaggtgtggagaattcctacactggtcgttatttgaagccggtattggagcgc
gataccgtgcgtagtcgtgagcttgaaagtagtcaggtataa
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