Paenibacillus hunanensis: SK066_06205
Help
Entry
SK066_06205 CDS
T09633
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
phk
Paenibacillus hunanensis
Pathway
phk03410
Base excision repair
phk03430
Mismatch repair
phk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SK066_06205 (recJ)
03430 Mismatch repair
SK066_06205 (recJ)
03440 Homologous recombination
SK066_06205 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phk03400
]
SK066_06205 (recJ)
DNA repair and recombination proteins [BR:
phk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SK066_06205 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SK066_06205 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SK066_06205 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
GH3
Motif
Other DBs
NCBI-ProteinID:
WPP42527
LinkDB
All DBs
Position
1532945..1535353
Genome browser
AA seq
802 aa
AA seq
DB search
MIHSQYHWNVKHPNIAAAQQLSRELNIAPLTATLLSGRGYTTPAAAETFLESSSGTSHDP
FLLAGMPEAVERIRLALERSEKIWIYGDYDADGVSSTSLMIQLMRVLKADFDIYIPHRAK
EGYGLHNHALDLAHEQGVTLIVTVDTGISAVEQIAYAGELGIDVVVTDHHEPPEKLPAAV
ALVNPKLPYCPYPFKGLAGVGVAYKLAQALLGEVPDSWLEIVAIGTVADLMPLQDENRRM
VSIGVQQMKQSAFPGIHALLNIAAIDPAQVSATHIAFAMAPRINASGRMEHAKRAVELLT
TTNMSLADRIAFELDQLNKERQELVNRMVQEAIVMLESERDQHPRGVPDVIVVAGEGWNP
GVVGIVASKLLDRYYRPTIVLGIDPETGMGKGSARSIPGYDIYRALLDCEDVLDHFGGHP
SAAGMSLHRDQLDAFRSRLNERAAQLLTEEDLVPQTEADCECSVDQITLEAVEELERLAP
FGMNNPLPKIVLRGVTLSEARAIGKTSDHLRLVVEQDGAVLEGVAFGKGELASLLRAGDH
IDLLAETSINEWRGVRKPQLMVQDIAVPGLQVWDRRGADDWTGELTTIQHKWSRYMATEM
GQFGVLGDEKRMETLKSQLSDVSLWGYDRQVDIAACNHVSIQYGAEAIRTLCLLSLPAHI
EQLNVIFERFTGVENIVLLHDRPDRQDRLQIPDREQFKLIYGWLAKSSATIAEEQKLIPY
LSQKTSSSVRMVQMMLDVFEELDFIVRQDGQIRMNTAPDKRPLGSSQLYRELGELAEMEY
MLCESDLPQLTSWMIARMQGVS
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgattcattcacaatatcactggaatgtaaaacaccccaatatagcggctgcacagcag
cttagccgcgagttgaatatcgctccgctaactgcgacgctgttaagcgggcgagggtat
acaacaccagcagcagcagagacttttctggagagcagctcgggaacgagtcatgatcca
tttctgctggcaggtatgccggaggcggttgagcgtattcgcctggcgctggaacgtagc
gagaaaatctggatttatggtgattacgatgcagacggtgtatccagcacctcactgatg
attcaattgatgcgcgtattaaaagcggattttgacatctatattccacatcgtgccaag
gaaggctatggcctgcacaatcatgcgctcgatctagcacatgagcagggtgttaccctg
atcgtgacggtggatacaggcatcagtgctgtcgagcagattgcgtatgcaggtgagctt
ggcatagacgttgtagtaaccgatcaccacgaaccgccagagaagctacccgcagcagta
gcactcgtcaatccgaagctaccgtattgcccgtatccgtttaaagggctagccggtgta
ggggtcgcctataagctagcccaggcgctgctgggcgaggtgccggattcctggctggag
atcgtagcgatcggtacggtagccgatctgatgccactacaggacgagaatcggcgtatg
gtgagcatcggtgtgcagcaaatgaagcaaagcgcttttccaggtatacatgcgttactt
aatattgctgccatcgacccggcacaggtgagtgcgactcatatcgcatttgcaatggca
ccacgtattaatgcgagtggtcgaatggagcatgctaaacgtgctgtcgagctgttaacg
acaacgaatatgagcttagctgatcgaattgcctttgagctggatcaattaaataaagag
cgtcaggagcttgtcaaccggatggtgcaggaagccatcgtcatgctagaatcggagcgt
gatcagcatccacgcggtgtgcctgacgttattgtcgttgctggtgagggctggaatcca
ggggtagtgggtatcgttgcctccaagctactggatcgttattatcgtccaacgattgta
ctcgggatcgatcctgagactggaatgggtaaaggctcagcacgttcgattcccggctat
gacatttatcgtgcattgctcgattgtgaggatgtgctggatcattttggtggacaccca
tccgcagcgggtatgagcttgcatcgggatcaattggatgccttccgcagtcgtctgaat
gaacgtgcagcacagctactcactgaggaagatctggttccacagacagaagccgattgt
gaatgcagtgtagatcagatcacactggaagcggtcgaggagctggagcggctcgctcca
tttgggatgaataatcctttacctaaaattgtcctacgaggcgttactctatctgaagca
cgtgcgatcggtaaaacgtcagatcatctacgactggtcgtcgagcaggatggagctgtg
cttgaaggcgtcgcctttggtaaaggagagctagcatcgctgctacgtgcaggcgatcac
atcgatctgctggcagagaccagcattaatgagtggcgcggtgtacgtaagccgcaattg
atggtgcaggatatcgctgtaccgggcttacaggtctgggatcgccgtggtgctgatgat
tggacaggcgagctaacgaccattcagcacaaatggtcgcgttatatggcaaccgaaatg
ggacaattcggtgtactgggcgatgaaaaacgaatggaaactttaaaaagccaattgtcg
gatgtatccctttggggttatgatagacaagttgatattgcggcttgcaatcatgtctcc
atacagtatggggcagaagccatacgcacattatgtctgttatcattaccagcgcatatt
gaacaattgaacgtcatttttgagcgctttaccggcgtggaaaatatcgttctgctgcat
gatcgtccagaccgtcaggatcgcctgcaaattcccgatcgggagcaattcaagctgatc
tacggctggctcgccaaaagcagtgctaccattgctgaagaacagaagctaatcccgtat
ttgagtcaaaaaacatccagctcggtacgtatggtgcaaatgatgctggacgtgtttgag
gagctggacttcatcgtgcgtcaggatggacagattcgcatgaatacagcgcctgataag
cgtccgctcggtagctcacagctgtaccgggagcttggcgaactggctgaaatggaatat
atgttatgtgaaagtgatctgccacagttgacttcatggatgattgcccgtatgcaaggc
gtatcataa
DBGET
integrated database retrieval system
