Paenibacillus hunanensis: SK066_07680
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Entry
SK066_07680 CDS
T09633
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
phk
Paenibacillus hunanensis
Pathway
phk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
phk00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SK066_07680 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phk03021
]
SK066_07680 (rpoD)
Transcription machinery [BR:
phk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SK066_07680 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
WPP42811
LinkDB
All DBs
Position
1899272..1900399
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AA seq
375 aa
AA seq
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MANDQHTELETELTLEQVKEQLMEVGKKRGSLNYKDITERLAAFDQDAEQIDEFYEQLGD
NGVEVINEGDEEVRRDSDSDNENGDNEFSFDDDLALPPGIKINDPVRMYLKEIGRVPLLS
ADSEVELAKRIEQGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVE
KFDHTKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGRE
PSPEEIAAEMELSVEKVREIMKIAQEPVSLETPIGEEDDSHLGDFIEDQDALAPADAAAY
ELLKEQLEDVLDTLTEREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRK
LRHPSRSKRLKDFLE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgatcagcatactgaattggaaaccgaattaacattggaacaggttaaggag
cagctcatggaagtgggcaagaagagaggctccttgaactacaaagatattacggagaga
ctggctgcatttgaccaggatgccgagcaaattgatgagttttacgagcaattgggtgat
aacggcgttgaagtaatcaatgagggtgacgaagaggttcgtcgtgattccgacagtgat
aacgaaaacggtgataacgagtttagctttgacgatgatctggcattgccgccaggtatc
aaaatcaatgacccggtacgtatgtacctgaaagaaatcggtcgcgttccgctgctgtct
gctgacagcgaggtagagctggctaaacgcatcgagcaaggtgatgaggaagcaaaacgc
cgtctggcagaagccaacctgcgtctcgtagttagtatcgcgaagcgctatgtcggtcgt
ggtatgctattcctggatctgattcaggaaggtaatatgggtctgatcaaggcggttgag
aagtttgaccatacgaaaggatacaagttcagtacgtatgcaacatggtggattcgtcaa
gcgatcacccgtgcgattgccgaccaggcaagaacgatccgtatcccggttcatatggtc
gaaacgatcaacaagctgattcgtgtatcccgtcaacttctgcaagagctgggacgcgag
ccgtcaccagaggaaattgcagcagaaatggaactgagtgttgaaaaagtacgcgaaatc
atgaaaatcgcacaggagcccgtatcgctggaaacaccaatcggtgaagaagacgattct
cacctgggcgacttcatcgaggatcaggacgcactggcacctgctgatgcagcagcttat
gagctgctcaaggagcaactggaagacgtactcgacacgctgacagagcgtgaagaaaac
gtactgcgtctgcgctttgggctggatgatggtcgtacgcgtacactcgaagaagtaggt
aaagtgttcggcgttacccgcgagcgtattcgtcagatcgaagccaaagctctgcgcaag
ctgcgccatccaagccgtagcaaacgtctgaaagatttcctcgaatag
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