KEGG   Paenibacillus hunanensis: SK066_10540
Entry
SK066_10540       CDS       T09633                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
phk  Paenibacillus hunanensis
Pathway
phk03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:phk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SK066_10540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phk03400]
    SK066_10540
Enzymes [BR:phk01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SK066_10540
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SK066_10540
DNA repair and recombination proteins [BR:phk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SK066_10540
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco NFACT_N Ribosomal_S13
Other DBs
NCBI-ProteinID: WPP43336
LinkDB
Position
2588861..2589685
AA seq 274 aa
MPELPEIENYKVQLTHYILNTSIEKLVIHRARVANVEADPVNLMLSGNRIAFIERRGKYL
NLHLHSGHRLLISIVAGSSLYYGLREQNEDRKCDVELQFEDGSSLYYTAGRQGVFHYCSA
RESQEYFAGLGLEATDRKLTREQFIKLLKGRRSALKTALMNQSLIAGIGSYYADEIAFTA
GILPSAKVQELDEEALGKLYEAMRNVLQEAIDAGGHMEGQPLTANDSLTGGFHALRRVYE
REGEPSVRSSDDKVTKMEVAGKKAYYCPASQFEN
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcctgaattgccggaaattgaaaattataaagtacaactgactcattatattttgaac
acatcgattgagaagctggtgatccatcgtgcgcgtgtagcgaatgtagaggcagatcca
gtaaacctgatgcttagcggtaatcgtattgcctttattgaacgtcgtgggaaatatctg
aatttgcacctgcatagtggacatcgtttgctgattagcatcgtggcaggtagctcgctg
tattatggtctgcgtgagcaaaatgaagatcgcaaatgtgatgtagagctgcaattcgaa
gatggtagctccctgtattacacagccgggcgtcagggcgtattccactattgctctgcg
cgagagtcgcaggaatactttgccggtctcggtctggaagcaacggatcgtaagctgaca
cgcgagcaatttatcaagctgttaaaaggacgccgcagtgcattgaaaacagcgctgatg
aatcagtcgctgatcgcagggattggcagctattatgcagacgagattgcctttaccgca
ggtatcctgccttcggcaaaggtgcaggaactggatgaggaagcactaggcaagctatat
gaagccatgcgtaatgtgctacaggaagcgattgatgcaggtgggcatatggaagggcaa
ccgctgacagcgaatgattcgttaacaggtggcttccatgcgctgcgccgtgtatatgag
cgtgaaggtgagccatctgtgcgttcgtcagatgataaggtgaccaaaatggaagtggca
ggtaaaaaagcgtactactgtccagcttcccaatttgaaaactaa

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