Paenibacillus hunanensis: SK066_14615
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Entry
SK066_14615 CDS
T09633
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
phk
Paenibacillus hunanensis
Brite
KEGG Orthology (KO) [BR:
phk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phk03032
]
SK066_14615 (topA)
03400 DNA repair and recombination proteins [BR:
phk03400
]
SK066_14615 (topA)
Enzymes [BR:
phk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SK066_14615 (topA)
DNA replication proteins [BR:
phk03032
]
Prokaryotic type
DNA Topoisomerases
SK066_14615 (topA)
DNA repair and recombination proteins [BR:
phk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SK066_14615 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_3
Toprim_2
MetOD1
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
WPP39850
LinkDB
All DBs
Position
complement(3613257..3615365)
Genome browser
AA seq
702 aa
AA seq
DB search
MADSLVIVESPAKAKTIGKYLGSKFIVKASMGHVRDLPKSQIGVDVENDFDPKYITIRGK
GSVLKELKDARKKVKKVYLAADPDREGEAIAWHLAHALDVNEGEACRVVFNEITKQAVKD
AFKTPRQINMDLVNAQQARRILDRLVGYKISPLLWKKVKKGLSAGRVQSVAVKIIIDREN
EISDFTPEEYWSITARLTINDTTFEAKFHQLNGEKKELHSEQDVNEILAAIENATFEVNE
IKERERLRHPAAPFTTSSLQQEAARKLNFRAAKTMSVAQQLYEGIDLGKEGTVGLITYMR
TDSTRIAASAQEEIREYITGKYGNEFIPEEPRQYTKKNANAQDAHEAIRPTSASRDPESV
KEYMSRDQFRLYKLVWERFAASQMASAVLDTMSVDIGAGPTTFRAVGSKVRFQGFMKVYV
EGNDDGKEEGEKFLPPMAKGDKPTPEHIEPKQHFTQPPPRYTEARLVKTLEELGIGRPST
YAPTLETIQKRGYVAIEEKKFMPTELGELVIQQMEEFFPEILNVEFTANMEQDLDHVGEG
QEDWVQVLNDFYESFEKRLEVAEEEMKEIEIEDEVSDEICDKCGRHMVYKLGRFGKFLAC
SGFPDCRNTKPIIKDIGVKCPTCHEGDVVERRSKKGRVFYGCNRYPECDFVSWDRPSPKP
CPVCSSMMVEKRNKQGVKLQCTSCDHTEMVEENENEEAVELD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtggcagattcactcgttattgtagaatcaccggcaaaagcgaaaacgatcggcaagtat
cttggcagcaaatttattgtcaaagcatctatgggccatgtccgcgatttgccaaaaagc
cagattggggtcgatgttgagaatgattttgatcccaaatacattaccatccgtggtaaa
ggttctgttctaaaagaattaaaagatgcacgaaaaaaagtgaaaaaagtctatctcgcg
gctgacccggatcgtgagggcgaagcgattgcctggcatttagcgcatgcgctggatgtg
aatgaaggcgaagcatgccgtgttgtatttaacgaaattaccaagcaagcggttaaggat
gcattcaaaacaccgcgtcaaattaatatggatctggtcaacgcacagcaagcacgtcgt
atacttgaccgtcttgtaggttacaaaattagccccctattatggaagaaagtcaaaaag
ggcttgtccgctggtcgtgtgcaatcggtagctgttaagatcattatcgatcgtgaaaat
gaaatttcagacttcacacccgaagagtattggagcatcactgccagactgacgattaac
gatactacctttgaagcgaagttccatcagctcaatggtgagaaaaaagagctgcacagt
gagcaggatgtgaatgagattctggcagcgattgagaatgctacctttgaagtgaatgag
atcaaggagcgcgaacgactgcgtcatccagcagctccatttactacatcgtctctgcaa
caggaagcggcgcgtaagctgaacttccgtgcagctaaaacgatgtcggtcgcacagcaa
ttatatgaaggtattgatctcggtaaagaaggaacagtcggtctgatcacctatatgcgt
accgactccactcgaatcgccgcttctgcacaggaggagattcgtgagtatattacaggc
aaatacggtaacgaatttattccggaagagccacgtcaatatacgaaaaagaacgcgaat
gcacaggatgcgcatgaagcgattcgtcctacctctgctagtcgtgatccagaatcggta
aaggaatacatgagccgtgaccagttccgtttgtacaagctggtatgggaacgttttgca
gcaagtcaaatggcttcggctgtactggatacgatgtctgtcgatatcggtgctgggcca
acaactttccgtgcagttggttccaaagttcgtttccagggctttatgaaggtgtatgtg
gaaggtaatgacgatggtaaggaagaaggcgagaagttcctaccgccaatggcgaagggc
gacaagccaacacctgaacatatcgagcccaagcagcattttacacagccgccgccacgt
tataccgaggcacgtcttgttaaaacgctggaggagctaggtatcggtcgtccaagtacg
tatgcgccaacattggaaacgatccaaaagcgtggctatgtagcgatcgaagagaagaag
ttcatgcctaccgagctgggcgagctcgttattcagcaaatggaagagtttttccctgaa
attctgaatgtagagttcactgctaatatggagcaggatcttgaccatgtaggagaaggt
caggaagattgggtacaggtgctgaatgatttttatgaatcgtttgagaagcgccttgaa
gtagccgaagaagaaatgaaggaaattgagatcgaagacgaagtctcggatgagatctgt
gataaatgcggacgccatatggtatacaagctgggacgcttcggtaagttcctcgcatgc
tccggtttcccggattgccgcaacacgaagccgatcattaaggatatcggtgtaaaatgc
ccgacctgtcatgaaggtgatgtggtggagcgccgcagtaaaaagggtcgtgtcttctac
ggctgtaatcgttatccagaatgcgactttgtatcttgggatcgtccatcgccgaagcca
tgtccggtatgtagctcgatgatggtcgagaaacggaataaacagggcgttaaattgcag
tgtacaagctgtgatcataccgaaatggttgaggaaaatgaaaatgaagaagcggtagag
ctcgattaa
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