Paenibacillus hunanensis: SK066_16025
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Entry
SK066_16025 CDS
T09633
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
phk
Paenibacillus hunanensis
Pathway
phk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SK066_16025 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phk03400
]
SK066_16025 (mutM)
Enzymes [BR:
phk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SK066_16025 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SK066_16025 (mutM)
DNA repair and recombination proteins [BR:
phk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SK066_16025 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
WPP40112
LinkDB
All DBs
Position
complement(3939631..3940482)
Genome browser
AA seq
283 aa
AA seq
DB search
MPELPEVETVRRTLNTLIPGKQIERVTVSLPRIIQRPDDPEQFALELQGHTFETVERRGK
FLRFILDGLVMVSHLRMEGRYGVYRSDEPVEKHTHVIFHFTDGTELRYKDVRQFGTMHLF
ATGEELQSKPLVQLGLEPLDPQFTDEQFISVISKRRTMIKPVLLNQAYVVGIGNIYVDEA
LFRAGIHPETIASDLSREQLIRLHEAIVSTLSDAVAAGGSSIKSYVNGQGEMGMFQHSLR
IYGRKAEPCQECGTLIEKTVVGGRGTHYCPVCQPLPARQKAMG
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgccagaagtagaaacagtcagacgcacgcttaacaccctgattcccggc
aaacagattgaacgggtaaccgtatcgctgccacgtattattcagcgaccggatgatcca
gagcagtttgcattggagctacagggacatacctttgaaacggtagaacgtcgcgggaaa
ttcctgcgctttattttagatggattagtgatggtatcccatttgcggatggaaggacgc
tacggcgtatatcgcagcgatgagccagtggaaaagcatacccatgttattttccatttt
accgatggtacagagctaagatataaggatgttcgtcaattcggtacgatgcatctgttt
gcgacaggcgaggagcttcaatcgaagccactggtgcagcttggattagagccgctggat
ccgcagtttacagatgagcagtttattagcgtgattagcaagcgtagaacgatgatcaag
ccagtactgctaaatcaagcctatgtcgttgggatcggtaatatttacgtggatgaagcc
ttattccgtgctggcattcatcccgagacgattgcatctgatctgagccgggagcagttg
attcgtctgcatgaagcgattgtatctactctaagtgatgcagttgccgcaggcggctcg
tcgatcaagtcgtatgtgaacggtcaaggcgaaatgggcatgttccagcatagccttcgt
atttatggacgcaaagcagagccttgccaggaatgtggtacattgatcgagaaaacagta
gtcggcggcaggggcacgcattattgcccggtatgccagcctttgccagcgcgtcaaaaa
gcaatggggtga
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