Paenibacillus hunanensis: SK066_16030
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Entry
SK066_16030 CDS
T09633
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
phk
Paenibacillus hunanensis
Pathway
phk03030
DNA replication
phk03410
Base excision repair
phk03420
Nucleotide excision repair
phk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SK066_16030 (polA)
03410 Base excision repair
SK066_16030 (polA)
03420 Nucleotide excision repair
SK066_16030 (polA)
03440 Homologous recombination
SK066_16030 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phk03032
]
SK066_16030 (polA)
03400 DNA repair and recombination proteins [BR:
phk03400
]
SK066_16030 (polA)
Enzymes [BR:
phk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SK066_16030 (polA)
DNA replication proteins [BR:
phk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SK066_16030 (polA)
DNA repair and recombination proteins [BR:
phk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SK066_16030 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SK066_16030 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
WPP40113
LinkDB
All DBs
Position
complement(3940818..3943511)
Genome browser
AA seq
897 aa
AA seq
DB search
MDKFMLIDGNSIIYRAFFAMQQPMTTSSGLHTNAVYGFTNMLLRVLEEHKPTHVMVAFDA
GKITFRHSSYQDYKGGRQKTPPELSEQFPLLKDLLTAFGISHYQLEGYEADDIIGTLSRQ
AEEKGCEVLVLSGDKDMLQLASEHVRIALTRKGVSEIEQYGPHEVQERYGLTPAQIIDLK
GLMGDASDNIPGIPGVGEKTALKLLHQFGTVEQVLENTDQLKGKMKEKVETHAEDARLSK
ELATIFREVPFDASWDSMKYEGIQAATAVTALQKLEFKSILQRLDLSDVAAHPDATLDEL
NADAEGGSAPMPDLKVTMLGEQQVSELEAALSTVDVVHVESHGDNPHHAELVGVLFGTPE
EYYFLTPDVLKSDAAAAIRTWLGDSSIPKQGHDLHRADLVLFWEGIAFAGAAFDIQIAAY
LLDPTESGQSLSALASKYALPVLSEDEAVFGKGAKYKVPEQDVLSQHLARKAATIRQLVP
LQREQLEQNEMTPLFSDLEMPLSRILADMEKQGVAVNTDELRALGKEFEQQISKLVAQIY
DMAGTEFNLNSPKQLGEILFDRLGLPVKKKTKTGYSTSADVLEELAPYHDIVQYILTYRQ
LAKLQSTYVEGLLKEIHPKSGKVHTYFRQTITATGRLSSQFPNLQNIPIRLEEGRKLRKV
FVPSEQGWSMLSADYSQIELRVLAHISDDAGLKDAFVHDMDIHTKTAMDVFGVAQEQVDS
NMRRSAKAVNFGIVYGISDYGLSQNLGITRKEAGDFINQYFDVFQGVRRYMDEIVDEAKQ
NGYVKTMLERRRYLPEIRSSNFNLRSFAERTAMNTPIQGTAADIIKLAMVHMDRALTENR
LKSRMLLQVHDELVFEVPADELEQMKTLVPQVMRDALELSVPLKADVSYGANWYEAK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggacaaattcatgttaatagatggaaacagtattatttaccgcgcgttctttgcgatg
cagcagccgatgacgacgtcgtcaggcttgcatacgaatgcggtatacggctttacgaat
atgctattacgggtgctggaggagcataagccgacccatgtgatggtcgcatttgatgcg
gggaagatcaccttccgtcatagcagctatcaggattacaagggcggtcgtcagaagaca
ccacctgagctatccgagcaatttccgttactcaaggacttgctaactgcgttcggtatt
tctcattatcagctagagggctatgaagcggatgatattatcggtacattatcccgtcag
gcagaggaaaagggttgcgaggtgctcgtcttgagtggcgataaggatatgctccagctt
gcctctgagcatgtacgcatcgcgcttacacgcaagggtgtcagcgaaatcgagcaatac
ggcccccatgaggtgcaggagcgttatggattgacacctgcgcagatcatcgacctgaag
ggtttgatgggcgatgcttccgacaatattccgggcattccgggtgttggggagaagact
gcgctcaagctactacatcagtttggaaccgtagaacaagtactggaaaataccgaccag
ctcaaaggtaaaatgaaggaaaaggtcgagacgcatgcagaggatgcacgtttgagtaaa
gagctggcgaccatcttccgtgaggttccattcgatgcaagctgggatagcatgaagtac
gaaggaattcaagccgcgacagcagtaaccgccttgcaaaagctggagttcaagtcgatt
ttgcagcgccttgatctgagcgatgtagcggctcatccagatgcaacgctcgatgagctg
aatgccgatgcagagggtggctcagcaccgatgcctgatctgaaggtgaccatgctgggc
gaacagcaggtatccgagcttgaagccgcgctgagtacagtggatgtcgttcatgtagag
agtcatggcgataatccgcatcatgcggagctggtcggcgtgctgttcggtacaccagag
gaatattatttccttacaccggatgtactgaaaagtgatgcagcagcagcgattcgcaca
tggctgggcgatagctccattccgaagcagggacatgatctgcatcgcgccgatctggtg
ctgttctgggaaggcattgcttttgccggagctgcgtttgatattcagatcgctgcgtat
ttgcttgacccaacggaatccggtcaaagtctgagcgcacttgcttccaagtatgcgcta
cctgtattgtcagaggatgaagcggtctttggtaaaggtgcaaagtacaaagtacccgag
caggacgtactgagccagcatctagctcgtaaagcggcaacgattcgccagctggttcca
ctgcaacgcgagcaattagagcaaaatgagatgacaccactgttcagcgatctggaaatg
ccattatcgcgtattctagccgatatggaaaaacagggcgtagccgtgaatacggatgaa
ctacgcgcactgggcaaagaatttgaacagcaaatcagtaagctggtcgcgcaaatctat
gatatggcaggcacggaattcaacctgaattcaccgaagcaactgggcgagattttattt
gatcgccttggactgccagtgaaaaagaaaacaaaaacgggctattccaccagtgcagat
gtgctggaggagctggcaccgtatcatgatatcgtgcaatacattttaacgtatcgtcag
ctagccaagctgcaatcaacctatgttgaaggactgctcaaggagattcatccgaagtca
ggtaaagtacacacatacttccgtcagacaatcacagcaaccggacgtctatccagtcag
ttcccgaacctgcaaaatatcccgattcgtctggaagaaggccgcaagctgcgtaaagta
tttgtaccatccgagcagggctggtcgatgctatctgccgactactcccagatcgagctg
cgtgtactagctcatatctccgacgatgctggcttgaaggatgcgtttgtccacgatatg
gatatccataccaagacagcgatggatgtattcggtgtagcacaggaacaggtcgacagc
aatatgcgccgttctgccaaagccgttaacttcggcatcgtatatggcatcagcgactac
ggcttgtcccagaatctcggcatcacccgaaaagaagcaggcgacttcattaatcaatac
ttcgacgtcttccagggcgtgcgccgctatatggacgagatcgtcgatgaagctaagcag
aatggctatgtaaaaacaatgctagaacgtcgccgctatttgccagaaattcgttcgtcc
aatttcaacctgcgctccttcgccgagcgtacagcgatgaatacaccgatccagggcaca
gcagccgatatcatcaagctcgccatggtacacatggatcgcgcattaaccgaaaataga
ctcaaaagccgcatgctactacaggtacacgatgaactagtattcgaagtcccagccgat
gagctggaacaaatgaaaacactcgtaccacaggtcatgagagacgcactggagctttca
gtacccctcaaagcagacgtaagctacggtgccaactggtacgaagccaagtaa
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