Paenibacillus hunanensis: SK066_16125
Help
Entry
SK066_16125 CDS
T09633
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
phk
Paenibacillus hunanensis
Pathway
phk03030
DNA replication
phk03430
Mismatch repair
phk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SK066_16125
03430 Mismatch repair
SK066_16125
03440 Homologous recombination
SK066_16125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phk03032
]
SK066_16125
03400 DNA repair and recombination proteins [BR:
phk03400
]
SK066_16125
Enzymes [BR:
phk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SK066_16125
DNA replication proteins [BR:
phk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SK066_16125
DNA repair and recombination proteins [BR:
phk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SK066_16125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
tRNA_anti_2
SSB
Motif
Other DBs
NCBI-ProteinID:
WPP40132
LinkDB
All DBs
Position
complement(3967068..3970832)
Genome browser
AA seq
1254 aa
AA seq
DB search
MTPFVHLHVHSEYSLLDGAARIHDLVSRAAASGMTSLALTDHGVMYGAIPFYKACLQHGI
KPIIGCEAYYTAGSRREKAARKDQPIHHLLLLAKNETGYRNLMKLCSIGHLEGFHYKPRI
DGEALRQYHEGIICLSACLGGEIPQHLLHGEPELAKQAAQRYLDIFGEDFYIELQDHGLA
EQKKVTPQLIALARELNIPLVATNDVHYLTEDDAKTQDVLICIGTGKTVDDESRLRIPTN
QLYLKDGEQMATLFRHVPEAITNTERIAEKCELTIPLGQSLLPSYHPLPDDLSAERYLEQ
LCREGLERRYADGELWNDAEERSKLEERLAYELSVIGSMGFADYFLIVWDFMSFAHRAGI
ATGPGRGSSAGSLVAYVLGITNVDPIRYKLLFERFLNPERVSMPDIDIDFSDLRRDEMID
YVVSKYGRDRVAQIITFGTLAARAAVRDVGRALAVPYADTDRAAKLIPAQIGVTIQRALE
QVPELRERYEKSAAVRELIDTAIKVEGMPRHASTHAAGVVISSGPLTDVVPLQEGSEHAV
LTQYAMENLEAIGMLKMDFLGLRTLSIIERCLQWIQEQTGETIDFNHISIEDKLTYYMLS
QGDTMGVFQLESAGIRRVLRDLKPSEFEDIVSVNALYRPGPMDFIPRYIDGKHGRITVEY
PHPDLKPILEDTYGIIVYQEQIMQIASLMAGFSLGEADLLRRAVSKKKREVLDQEREHFV
RGSLKLGYTEQDANAVYDMIVRFADYGFPRAHATAYGVLAFQTAYLKAHYPVQFIASMLT
AVMGTHRKVAEYVLECQRIGVEVLPPDIHLSGVNFTPVLEESSTDSSTSIADQNDGATAT
DDQPELRLYQGGGHIRFGLGAVKNVGTQAINSIIKERQERPFDSLVDFCRRVDPKACNKR
VIESLIQAGAFDSLPGHRAQLLQMLDETMKEAAKWRKEREELQIEMFDFDLGEKPNWEVS
YPDVPPFTAGEQLEFERELLGLYLSGHPLDDYEDAIEQSGLSRLMNLHEAADDSIVAVAG
MVVSLKAITTKQGKSMAFMEMEDQIEKCEVVMFPEIWRKCRELVDKGVLLIVRGRLQQDD
ESFKLLAEEIVSLTPSAAAEMADKVKQRAQATRSKKPERSEAAPSASRATGTGASTTATG
MRTSRTKSSTSTVNATRTASTDTEANVKTESAPAQERTPKQHVYIKITREAQQAGQLEQL
KQLLADHPGQLGTMLFYEEGQKLLDLSGSYRIKPSPALFSAIEQMLGEGTVRVK
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgaccccattcgtccatttgcatgtgcatagtgaatacagtctgctcgacggggctgcg
cgtattcatgatctggttagtcgtgcagcagcgtcaggtatgacctcgctcgcattgact
gaccacggtgtcatgtatggagccatccctttttataaagcctgcctccagcacggtatt
aagccgattattggctgtgaggcgtattatactgccggttcacggcgagaaaaggcagca
cgcaaagatcagccgatccatcatctattgctgcttgccaaaaatgaaacaggctaccgg
aacctgatgaagctgtgttcgatcgggcatctggagggctttcattataagcctcggatt
gacggggaagcattgcgtcagtatcacgagggtattatttgcctgagtgcctgtcttggc
ggcgagattccacagcatttgctacatggagagccagagctagccaagcaggcggcacag
cggtatttggatattttcggtgaggacttttatatcgagcttcaggatcatggactggca
gagcagaagaaggtcacacctcaactgatcgccctggcgcgtgagctgaatattccgctt
gtcgctacgaatgatgtgcattatctgactgaggatgatgcaaaaacgcaggatgtgctg
atctgtatcgggacgggaaaaacggtcgatgatgagagccgtctgcggattccaaccaat
caattgtatttaaaagatggcgagcagatggcaacactgttccgtcatgtgccagaagcg
attacgaataccgaacggattgccgagaaatgtgagcttaccattccgctcggccaatcg
ctactgccctcgtatcatccgttaccagatgatctgagcgcagagcgttatctggagcaa
ctctgccgtgaaggcctggagcgtcgctatgcggatggcgagctgtggaatgatgcagag
gagcggagcaagctggaggaacgacttgcatatgagctatcggtaattggtagcatgggc
tttgctgattatttcctgatcgtatgggattttatgagctttgcacatcgtgcaggtatt
gctaccgggccaggtcggggttcgtccgcaggcagtctggttgcatatgtgcttggcatt
accaatgtcgatccaattcgctataagttgctatttgagcgttttctgaatccagagcgg
gtatcgatgcctgatatcgatatcgactttagcgatctgcgccgggatgagatgatcgat
tatgtcgtttccaaatacggacgtgatcgcgtcgctcagattattacctttggtacgctg
gcagcgcgagcagctgtacgtgatgtgggacgggcattagcggtgccttatgcggatact
gaccgcgctgccaagctcattcctgcccagattggtgtaacgattcagcgtgcgctggag
caggtgccagagctacgcgagcgctatgaaaagtctgctgctgtgcgtgagttgattgat
acggcgattaaggtagagggcatgccacggcatgcgtctacccacgcggcaggtgtcgtt
atttccagcggcccgctaaccgatgtagtgcctctacaggaaggcagcgagcatgcggta
ttaacacagtatgcgatggaaaatctggaagcgatcggtatgctgaaaatggacttcctc
ggtctgcgtactctatcgattattgaacgctgtctgcaatggattcaggagcagacgggg
gaaacgattgattttaaccatatttctattgaggataaactgacgtattatatgctcagt
cagggcgatacgatgggtgtattccagcttgagtctgctgggattcgtcgtgtgctacgc
gatctcaagccgagtgaatttgaagatatcgtatctgtaaatgccttgtatcgtccaggt
ccaatggactttattccgcgttatattgatggcaagcatggacggattacggtggaatat
ccgcatccagatttgaagccgattttggaggatacgtacggtattatcgtgtatcaggag
cagattatgcagattgcctcattgatggcaggcttctcgctcggtgaagccgatctgttg
cgtcgtgctgtctccaagaagaagcgcgaagtgcttgaccaggagcgggaacactttgtt
cggggtagcctcaagctgggctatacagagcaggatgcgaatgcggtctatgatatgatc
gttcgctttgctgattatggcttcccacgtgcgcatgcgactgcctatggtgtacttgca
ttccaaaccgcttacctgaaggcgcattatccagtgcagtttatcgcgtccatgttaact
gcggtaatgggcacacatcgtaaagtagctgaatacgtgctggagtgtcagcgtattgga
gtagaggtgttgccgccggatattcatttgagcggtgtgaactttacgcccgtgctggag
gagtcgtctaccgattcttctacctctattgccgatcagaatgatggagcaacagcaacg
gatgatcagccggagctgcgtttatatcagggaggcgggcatatccgcttcggtctggga
gcagtcaaaaatgtcggtacacaggcgattaacagcattatcaaggagcgtcaggagcga
ccatttgatagtctggtggacttttgccgacgcgttgatcccaaagcatgcaataagcgc
gtaatcgaatcgcttattcaagcaggcgcctttgatagcttgcctggacatcgtgcgcag
ctgctacaaatgctggacgaaacgatgaaggaagcggcaaaatggcgcaaggagcgtgag
gagctacagatcgagatgtttgattttgatctgggcgagaagccgaactgggaggtatcc
tacccggatgtgcctccatttacagcaggagagcagctggaatttgaacgcgagctgctg
ggtttatatctatccggtcacccactggatgactatgaagatgccatcgagcaatccggt
ttatcacgattgatgaatttacatgaagcggcagatgattcaattgtggcggttgcgggt
atggttgtttcactcaaggcaattacgaccaagcagggcaagtcgatggcatttatggaa
atggaagaccagatcgagaagtgcgaagtggtcatgtttcctgaaatctggcgtaaatgt
cgtgagctggtcgataagggtgtactgctgattgtacgcggacgcttgcagcaggacgat
gagagcttcaagctactggcagaggagattgtctcactgacgccgtccgcagcagccgag
atggcagacaaggtcaagcagcgggcacaagccacacgaagcaagaagccggagcgtagt
gaagctgctccatctgcaagtcgtgctacgggtacaggtgcatcgacaacagcgacaggc
atgcgaacctcgcgtaccaagtcgtcgacctcgactgtcaatgcgacccgaacggcttcg
accgatacagaggctaatgtgaagaccgaatctgctccagcgcaagagcgtacgcctaag
cagcatgtatatatcaaaattacacgcgaagcccagcaggcaggacagctagagcagctc
aaacagctgttagcggatcatccgggtcagctcggtacgatgctcttttatgaagagggg
cagaagctgcttgatctgagtggcagctatcgtatcaagccgtcaccagcattatttagc
gccattgagcagatgctgggcgaaggcacggtgcgtgtgaagtaa
DBGET
integrated database retrieval system
