Paenibacillus hunanensis: SK066_17005
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Entry
SK066_17005 CDS
T09633
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
phk
Paenibacillus hunanensis
Pathway
phk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SK066_17005 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phk03019
]
SK066_17005 (recQ)
03400 DNA repair and recombination proteins [BR:
phk03400
]
SK066_17005 (recQ)
Enzymes [BR:
phk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SK066_17005 (recQ)
Messenger RNA biogenesis [BR:
phk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SK066_17005 (recQ)
DNA repair and recombination proteins [BR:
phk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SK066_17005 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
NADH_4Fe-4S
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WPP40295
LinkDB
All DBs
Position
complement(4182700..4184568)
Genome browser
AA seq
622 aa
AA seq
DB search
MSIQAPVMQQAQELLQKYFGYEDFREGQRKIVASLLDRQDTLGIMPTGGGKSICYQIPAL
VHDGVTLVISPLISLMKDQVDALEAAGIPAAYINSTLSGREVNERIRAARRGELKLLYVA
PERLELDWFRDEMNSVNITCLAVDEAHCVSQWGHDFRTSYLEIAPFVDQMPERPMVAAFT
ATATPEVRSDILRLLQLRHPEVFITGLGRDNLSMSVLRGTQRKEFVIDYARTHENDSGII
YAATRKDVDDLYSRLLSSGVQAGRYHAGMSDEERDQSQEAFLYDDVRVIVATNAFGMGID
KSNVRYVIHYNMPKNMEAYIQEAGRAGRDGDPSECILLFSPQDIMTQKFLLEQNMNEGDR
KHNDYRKMQQMIDYCYTTKCLRNAMLDYFGEQHSGETCGQCSSCRDSRELVDTTIEAQKI
FSCIYRLRERFGVSVVAQVLKGSRNKKILQYKFDELPTHGLLSHLTEKEISERINVLAAE
GYLLLTEGQYPVVKLQPLAAEVLKGQHKVMQRAPLPVATPAGRASSSRSRAGSEELSAVN
ETIFEQLRLIRRELASREGVPSYIIFNDATLREMSVIEPQSEGEMLTIKGVGEVKYRKYG
EPFLAFFQKKSMEENSTYGDEY
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgagtatacaggcacctgtaatgcagcaggctcaagaattgctgcaaaagtattttggt
tatgaagatttccgcgaaggtcagcgtaagattgtagcgagtctgctggatcgtcaggat
acactcggtattatgccaaccggtggtggtaagtcgatctgttatcagattccagcgctg
gtgcatgatggagtgacgcttgtcatctcgccactgatctccctgatgaaggatcaggtg
gatgcgctggaggcggcgggcattccagctgcttatattaacagcacactgagcggacgt
gaagtgaatgaacgtattcgcgcggcacgtcgtggcgaattgaagctactctatgttgca
cccgagcggctggagctggactggttccgcgatgagatgaacagtgtgaatattacctgt
cttgcggtcgatgaagcgcactgtgtatcgcaatggggacatgatttccgcacaagctat
ctggagattgcgccatttgttgatcagatgccagagcgtccgatggtggctgcttttaca
gcaacggcgacaccggaggtgcgtagtgatattttacgtctgctccagctacgtcatccg
gaggtgtttattaccggactgggacgggataatctgtcaatgtcggtactacgtggcacg
cagcgtaaggaatttgttattgattatgcgcgtacacatgagaatgattccggtattatt
tatgcagcgacacgtaaggatgtagacgatctgtatagtcgcctgctaagcagcggtgtg
caggcaggacgttatcatgctggtatgagtgatgaggagcgtgaccagagccaggaagcc
tttttgtatgatgatgtacgtgtgatcgtagcgaccaatgcgttcgggatggggattgat
aagtcgaatgtacgctatgtcattcactataatatgccgaaaaatatggaggcttacatt
caggaggctggacgtgccggtcgtgatggcgatccgagtgaatgtattcttttatttagc
ccgcaggatattatgacgcaaaagttcctgctggagcaaaatatgaacgaaggcgatcgc
aagcataacgactatcgtaaaatgcagcagatgatcgactactgctatacaaccaaatgt
ctgcgtaatgcgatgctggattattttggcgagcagcattccggcgagacctgcggtcaa
tgtagctcctgccgtgatagccgtgagctggtggatacgacgattgaggcgcaaaagatt
ttttcctgtatttatcgactgcgtgagcgttttggtgtatcggtcgttgcacaggtgctc
aagggctcacgtaacaaaaagattctacaatacaaattcgacgagctaccaacacatggt
ctgctgtcacatctgacggaaaaagaaatctccgagcgcatcaacgtgctggcagcagaa
ggttatctactgctcaccgaaggtcagtatcctgtcgtcaaattacagccgcttgctgct
gaggtgctcaaagggcagcataaggtcatgcaacgtgcgccattgccagtagcgacacca
gctggacgcgcatcgagtagccgttctcgtgctggcagtgaagagctatccgccgtgaac
gaaacgatcttcgagcagctacgcctcattcgccgcgagcttgcttcgcgcgaaggcgta
ccatcgtatattattttcaatgatgcgaccctgcgcgagatgagtgtgatcgagccgcaa
agtgaaggcgagatgctcacgatcaagggtgtcggtgaagtgaagtatcgtaagtatggc
gagccgttccttgcctttttccaaaagaaatcgatggaagagaacagcacctatggcgat
gaatattaa
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