Paenibacillus hunanensis: SK066_17300
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Entry
SK066_17300 CDS
T09633
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
phk
Paenibacillus hunanensis
Pathway
phk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SK066_17300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phk03400
]
SK066_17300
Enzymes [BR:
phk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
SK066_17300
DNA repair and recombination proteins [BR:
phk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SK066_17300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
WPP40350
LinkDB
All DBs
Position
complement(4252505..4253623)
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AA seq
372 aa
AA seq
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MLKIGSHVSFSNKGLLSAATEADQYGSSSFMIYTGAPQNTRRKPMDTMFIEEGKAKMDAM
GVEEIVVHAPYIINLGSYKENTYELAVNFLQEEIHRTHEIGVRNIVLHPGAFTDMDAEYG
IKRIAAGLEQVLAGVRETDVNIALETMAGKGTEIGRSFEEIARIMDLVPHNERLTVCFDT
CHTHDAGYDLVNNLDGVLDEFDRTVGLDRIAVVHVNDSKNPVGAGKDRHTPIGSGWIGYE
AIQRVVHHEKLKNRPFILETPWIGKDAKKQHPMYEIEIALLRGDVAGRFGNEFVDDVGKL
HQFFDGKGIDARTYVLDTWAVLKNDAKARKADPREPLERLYDLVAEEGLFTTLREEQINS
RLIAWLAGKQSL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgttgaaaattggttctcatgtatcgttttcaaataaaggtctgctcagtgcagcaact
gaggcagatcaatatggatcaagctcgtttatgatctatacaggcgcaccgcaaaacacg
cgccgtaaaccgatggacacgatgttcatcgaagaaggtaaagcgaaaatggatgcaatg
ggcgttgaggaaattgttgtccatgcaccgtatatcatcaatcttggctcgtataaagaa
aatacgtatgagctggctgtaaactttttgcaggaagaaattcatcgtacgcatgaaatt
ggtgtacgcaatattgttctgcatccaggtgcttttaccgatatggatgctgagtatggc
atcaaacgaatcgcggcaggtttggagcaggttctggctggcgtacgcgaaacagatgta
aatatcgcacttgaaacgatggctggtaaaggaacagaaattgggcgtagctttgaagag
atcgctcgtattatggatcttgtgccgcacaatgagcgtctgaccgtatgctttgatacc
tgtcacacgcatgatgcaggctatgatctggtgaacaatctggatggcgtgctggatgag
tttgaccgaaccgttgggcttgatcgtatcgctgttgtgcacgtgaacgatagtaaaaat
ccagttggcgcaggtaaagaccgccatactccgatcggctcgggttggattggctatgag
gcgattcagcgtgttgtgcaccatgagaagctgaaaaatcgtccattcattctggaaacg
ccttggatcggaaaagatgcgaaaaaacagcatccgatgtatgagattgaaattgcgttg
ctgcgtggtgatgtggctggacgctttggcaatgagtttgttgacgatgtgggcaagctg
caccaattctttgatggaaaaggaatcgatgcacgtacttatgtgctcgatacgtgggca
gtgctgaaaaacgatgcgaaagcacgtaaagccgatccgcgtgagccgctggagcgtctg
tatgatctagtcgcggaagaaggcctgtttactacactgcgtgaagagcagatcaattcg
cgtctgattgcctggctggcaggaaaacaatcactgtaa
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