Paenibacillus hunanensis: SK066_18580
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Entry
SK066_18580 CDS
T09633
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
phk
Paenibacillus hunanensis
Pathway
phk00040
Pentose and glucuronate interconversions
phk01100
Metabolic pathways
phk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
phk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SK066_18580
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SK066_18580
Enzymes [BR:
phk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SK066_18580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
NUP
Motif
Other DBs
NCBI-ProteinID:
WPP40581
LinkDB
All DBs
Position
complement(4578478..4579650)
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AA seq
390 aa
AA seq
DB search
MIHFSKSSRKAPSPIKLVLLSTALMSALVWTGPGTHEAHAASTGGYATANGSNEAAVTVT
NLQELENAFNAGKHHIVIKGNIYGGTKPKTFTFASTQWNNTTIEGAPGGGAVLQNIQIKF
SGELLPAGTNIENVVVKNITFYGNIKDLQNLSGADTQPGGIGTNYLGVSFRRTSNILVDH
VTMYNISDDLFLISQGSDYATVSNSHFYFTDSWLNMNPNPLWNWVGTNQDLASERLAMII
GSNKNDSYQYGGGKLHVTLHHNWFGPNMKGRPLLRGYVHMYNNYFDNSTQPSGKNSKGFP
QEQYNAAQIGSGGNIFSEGNYFYRTNNSHQVGLDSGSDGYKFYERKNVYNQTTGTNAQGA
AFPGTSFPYSYTVDDAGSVPGTVQNNAGPK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgattcatttttctaagtcttcacgcaaagctccatccccgatcaagcttgtactgctc
agcactgcgctaatgtctgcgctcgtatggacaggcccgggtacacatgaagctcatgct
gcctcaacaggtggctatgcgacggctaatggctccaatgaagccgcagtgacggtaacg
aatctgcaagagctggaaaatgcatttaatgcaggcaagcatcatattgtgatcaagggc
aatatttacgggggaacgaagcccaagacatttacctttgccagcacacagtggaataat
acgaccattgagggcgcaccaggtggtggagccgtgctgcaaaatatccagatcaagttc
agcggcgagctgctgcctgccggtacgaacatcgaaaatgtagtcgtcaaaaatattacc
ttttacggcaatatcaaagacctgcaaaatctatccggtgcagatacccagcctggcgga
atcggcaccaactatctcggcgtatccttccgccgcacgagcaatattctcgtcgatcat
gtgaccatgtacaatatcagcgatgatctgttcctgatctcacagggctcggattatgcg
actgtatcgaatagccatttctactttaccgatagctggctgaatatgaacccgaatcca
ctgtggaactgggtcggcaccaatcaggatctcgcttccgagcgccttgcgatgattatc
ggatctaacaaaaacgattcctatcaatatggcggcggcaaattacacgtcaccctgcac
cacaactggttcgggccaaatatgaagggtcgtccactgctgcgcggctatgtgcatatg
tacaataactacttcgataacagcacccagccaagcggcaaaaactccaagggcttcccg
caagaacaatacaatgcagcccaaatcggcagtggcggcaacattttctcagaaggcaac
tacttctaccgcacgaacaatagccaccaggtcggcttagatagtggctccgatggctac
aaattctacgaacgcaaaaacgtctacaaccaaaccaccggaaccaacgcccagggcgca
gccttcccaggcacctcattcccatacagctacactgtagacgacgcaggcagcgtaccg
ggaaccgttcagaacaatgcaggcccgaaataa
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