Pelagibacterium halotolerans: KKY_1098
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Entry
KKY_1098 CDS
T01645
Name
(GenBank) uracil-DNA glycosylase, family 5
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
phl
Pelagibacterium halotolerans
Pathway
phl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KKY_1098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phl03400
]
KKY_1098
Enzymes [BR:
phl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KKY_1098
DNA repair and recombination proteins [BR:
phl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KKY_1098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEQ51131
UniProt:
G4R616
LinkDB
All DBs
Position
complement(1073963..1074610)
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AA seq
215 aa
AA seq
DB search
MALQTNPPPDCPLCPRLAEFRHINRRQFPDWHNAPVDNWGDTAPRLLIVGLAPGLRGANR
TGRPFTGDYAGDLLYATLKKFGLATGEFEADPNDSLQLVDTLIVNSVRCVPPQNKPTGPE
IATCRRFLIATIEANRQAKAFFALGRIAHESLLSALGERRAAFPFGHGREHTLSDGRILI
DSFHCSRYNTNTGRLTPEMFEDAMGKAKAAITAEG
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
ttggcgctccagaccaacccacctcccgattgcccgctctgtccgcggctggccgagttc
cggcacatcaaccgccggcaattccccgattggcacaatgcgccggtggacaattgggga
gacaccgccccccgccttctgatcgtcgggctggcgcccgggctgcgcggtgccaaccgg
accgggcgtccgttcaccggcgattatgcgggcgacctgctttatgcgacgctcaagaaa
ttcgggctggcgaccggtgagttcgaggccgatcccaatgacagtttgcaactcgtcgat
acgctgatcgtcaattccgtgcgttgcgtcccgccgcagaacaagcccaccgggccggaa
atcgccacctgccggcggtttcttatcgccaccatcgaagccaaccgccaggccaaagcc
ttttttgcccttggccgcatcgcccatgaatcgctgctcagcgcgctgggagaacgccgc
gccgccttccccttcggccatggacgcgagcacacgctcagcgacggccgcatcctgatc
gatagcttccactgctcgcgctacaacaccaataccgggcgactgacgcccgaaatgttc
gaggacgctatgggcaaggcgaaggctgcgataacggctgaaggctga
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