Pelagibacterium halotolerans: KKY_1100
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Entry
KKY_1100 CDS
T01645
Name
(GenBank) DNA-directed RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
phl
Pelagibacterium halotolerans
Pathway
phl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KKY_1100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phl03021
]
KKY_1100
03400 DNA repair and recombination proteins [BR:
phl03400
]
KKY_1100
Enzymes [BR:
phl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KKY_1100
Transcription machinery [BR:
phl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KKY_1100
DNA repair and recombination proteins [BR:
phl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KKY_1100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
EF-hand_5
Motif
Other DBs
NCBI-ProteinID:
AEQ51133
UniProt:
G4R618
LinkDB
All DBs
Position
1075387..1075755
Genome browser
AA seq
122 aa
AA seq
DB search
MARVTVEDCIEKIPNRFELVLAAAHRARMISSGGQITVDRDNDKNPVVALREIGDGTISP
EDLQEDLIHSLQKYVEVDEPEMDTAPRIETSSDEDGPVFDTISEEELLRGIESLAPPERR
DD
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
gtggcacgcgtcaccgtagaagattgcattgaaaagattccgaaccgcttcgagctggtt
cttgcggccgcccaccgggcccgcatgatctcctctggcggccagatcaccgtggaccgc
gacaacgacaagaaccccgtcgtcgccctgcgtgaaatcggcgatggcacgatttcgccc
gaggatctgcaggaagatctgatccactcgctccagaagtatgtggaagtcgacgagccg
gaaatggataccgcgccgcgcatcgaaacctcctcggacgaagacggcccggtgttcgac
accatttccgaagaagagctgctccgcggcatcgagtcgctggctcctcccgagcgtcgc
gacgattga
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