Pelagibacterium halotolerans: KKY_1268
Help
Entry
KKY_1268 CDS
T01645
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
phl
Pelagibacterium halotolerans
Pathway
phl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KKY_1268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phl03019
]
KKY_1268
Enzymes [BR:
phl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KKY_1268
Messenger RNA biogenesis [BR:
phl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KKY_1268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
CMS1
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AEQ51293
UniProt:
G4R815
LinkDB
All DBs
Position
1243555..1244976
Genome browser
AA seq
473 aa
AA seq
DB search
MRNVARGFGWICNRNGKRATLKVGAAKPHNVRRANGAAGKGHNLTQFQALGLDDHLLKAI
AGLGFSDPTPIQERAIPLVLEGRDIMGLAQTGTGKTAAFGLPIIQQLLAKTGKPDPKTCK
ALILAPTRELVNQIAVNLRAFTKGSPIKVNSVVGGMSIGTQIKALAHGSDIVVATPGRLL
DLVKRQAIRLDSAKHLVLDEADQMLDLGFIHALREISRLVGTPRQTLLFSATMPRQMNEI
AATYLTDPVRVQVATPGKAADKIAQSAHFVEPGGKLPLLKQLLAADADALSLVFARTKHG
AEKLSKTLAAAGFATGSIHGNKSQGQRDRTLKAFREGEIRVLVATDVAARGIDIPGVSHV
YNYELPQVAENYVHRIGRTARAGADGEAVALVSGEEYGLLLDIERLTGLSIATAGGERPL
RKSPSSPAKKRSQGRGGKPQPKGQGTKKPFDPSKAAPQRNRNKQRNKRARQAA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcaatgtggcgcgtgggtttgggtggatctgcaaccgcaacggcaaacgcgcaact
ttaaaagttggcgcggcaaagccgcataatgtccggcgcgcaaatggcgctgccggaaaa
ggacataatttgactcagtttcaggccctcggcctcgacgaccatcttcttaaagccatc
gcagggctgggcttttccgatcccacgcccattcaggaacgggccattccgctcgttctg
gaaggccgcgatatcatgggcctcgcccagaccggcaccggaaagacggccgcattcggt
ctgcccatcatccagcagcttctggccaaaaccggaaagcccgaccccaaaacctgtaag
gccctgatcctggcgccgacccgcgaactggtgaaccagatcgccgtcaatctgcgcgcc
ttcaccaagggttcgcccatcaaggtcaattccgtcgtcggcggcatgtcgattggaacg
cagatcaaggcattggcccatggcagcgatatcgtggtcgcgacgcccggccggctgctc
gatctcgtcaagcgccaggccatccgtctcgattcggcaaagcatctcgtgctcgatgaa
gccgaccagatgcttgatctcggtttcatccacgccctgcgcgaaatctcgcgcctggtc
ggcacgccgcgccagacacttctgttttcggcaaccatgcccaggcagatgaacgagatt
gccgcgacctatctcaccgaccccgtgcgcgtgcaggtggcgacgccgggcaaggcggcc
gacaagatcgcccagagcgcccatttcgtcgagccgggtggaaagcttccattgctcaag
caattgcttgccgccgacgccgacgcactctcgctggtcttcgcgcgtaccaagcatgga
gccgagaagctctcgaaaacgcttgccgctgccgggtttgcgaccggctcgatccacgga
aataaaagccagggccagcgcgaccgcacgctcaaggcgttccgcgagggagaaatccgc
gttctggtggccaccgacgtcgccgcgcgcggcatcgatattcccggtgtcagccacgtt
tataactatgagctgccccaggttgccgaaaactatgttcaccgcatcggccgcacggcc
cgcgccggcgccgatggcgaagccgtggcgttggtctcaggcgaagaatacggcctgctg
ctcgatatcgagcgcctgaccgggctttccatcgctacggcgggtggcgagcgcccgctg
cgcaaatcgccgtccagtccggccaaaaagcgttcgcagggccgtggcggcaagccgcag
cccaaagggcagggcaccaaaaagcctttcgacccgtccaaggcagcgccgcagcgcaac
cgcaacaagcagcgcaacaagcgggctcgccaggcagcctaa
DBGET
integrated database retrieval system
